Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1398 ATGAAGTGCCCGTATTGTTCAGCGGCGCAGGGGCGTTGCGCCACCACGACCTCCGGTAGGTGTATCACTGAATGCAGCTCTTGCGGGCGAGTAGTGGAAGAGCGACAATCCCATCCTCACCACGTGTTCCACACGCGCGCTCAGGACAACCCTTTGTGTCTTGTAACATCGGATCTCCCTCTCCCCACACTCCAACCCTTCCAAGACAACAACCACGATGACGAAGACCCGTTCGAGCCCACGGGCTTCATCACTGCCTTCTCCACCTGGTCCCTTGAGCCCGCCCCTCTTTACCTTCAGTCCTCTCTCTCCTTTTCTGGTCACCTAGCCGAGCTAGAACGCATTCTCGAATCTACGTCCTCATCTTCTTCGTCTTCGTCTTCCACTGTTGTGGTTGATAATTTGAGGGCGTATATGCAAATTATCGATGTAGCTTCCATTTTAGGGTTGGATTGTGATATTTCGGATCATGCTTTTCAGTTATTCAGGGATTGTTGCTCCGCTACCTGTTTGAGAAACCGCAGCGTCGAGGCCCTTGCCACCGCGGCTCTCGTTCAGGCCATTCGAGAGGCTCAAGAGCCCAGAACCCTTCAGGAAATATCAATTGCAGCCAATGTGCAACAAAAGGAAATAGGGAAATACATCAAGATACTGGGAGAAGCCTTACAGCTAAGCCAACCTATCAACAGCAATTCCATATCAGTTCATATGCCAAGATTTTGCACGCTTCTACAGCTTAATAAATCTGCTCAGGAATTGGCTACTCACATTGGAGAGGTTGTGATCAACAAATGCTTCTGCACTCGCAGGAATCCAATTAGTATCTCAGCAGCTGCTATATATTTGGCTTGCCAACTTGAAGACAAACGCAAAACTCAGGCAGAAATTTGCAAGATAACTGGTCTCACTGAAGTCACTCTCCGTAAAGTGTACAAGGAACTATTGGAGAATTGGGATGATTTGCTTCCCTCCAATTACACCCCAGCTGTTCCTCCAGAGAGGGCATTTCCGACAACCCTAATTCCTTCTGGTCGTTCTTCAACAACTAAGGTTGATGCAGTAGAGATTATTTCTTTGGACACAGAAAAGTTGCCAGAAATTAAACCTAGCAAGACAAATGAGGTCTCTGTCATGGTGCATCAGTCTAGAGGGAAGGGCGAGGCTGAAGGCAAAAGCAATGCTCGAGCAACCCATTCCATGGTGAATCAACAATCAACTTTTCGGCAATCCCAGCTACCCAGTGGGACAAACAGTCATAAGAATGTGTTACAAGGAATGGATATTGATGGATTGCAACTTAACCACCAACAACTTGAACAGATGGCAGAGGACACAAATGGAACTGCAAGTGTTAGTTCTCTAAAATCAAGTCAATTCGGCAGTCCTCCTGCTTCAGGTGCAAGCTCTGTCATGAGGCCGTTTTCAGTTTCACCTTCCCCTGGGTCCAATGTTCGATTTGTGCAGCCACCTAAAATAATGCCAGGTTATCCAGAGCACTGA 1500 0.476 MKCPYCSAAQGRCATTTSGRCITECSSCGRVVEERQSHPHHVFHTRAQDNPLCLVTSDLPLPTLQPFQDNNHDDEDPFEPTGFITAFSTWSLEPAPLYLQSSLSFSGHLAELERILESTSSSSSSSSSTVVVDNLRAYMQIIDVASILGLDCDISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTLIPSGRSSTTKVDAVEIISLDTEKLPEIKPSKTNEVSVMVHQSRGKGEAEGKSNARATHSMVNQQSTFRQSQLPSGTNSHKNVLQGMDIDGLQLNHQQLEQMAEDTNGTASVSSLKSSQFGSPPASGASSVMRPFSVSPSPGSNVRFVQPPKIMPGYPEH 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1398 499 Gene3D - 135 226 - -
Lal23g1398 499 Gene3D - 235 332 - -
Lal23g1398 499 CDD CYCLIN 237 315 IPR013763 -
Lal23g1398 499 SMART cyclin_7 235 316 IPR013763 -
Lal23g1398 499 SMART cyclin_7 139 220 IPR013763 -
Lal23g1398 499 MobiDBLite consensus disorder prediction 441 499 - -
Lal23g1398 499 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 494 IPR000812 GO:0006352|GO:0070897
Lal23g1398 499 PRINTS Transcription initiation factor IIB signature 18 38 IPR000812 GO:0006352|GO:0070897
Lal23g1398 499 PRINTS Transcription initiation factor IIB signature 181 200 IPR000812 GO:0006352|GO:0070897
Lal23g1398 499 PRINTS Transcription initiation factor IIB signature 207 222 IPR000812 GO:0006352|GO:0070897
Lal23g1398 499 PRINTS Transcription initiation factor IIB signature 236 254 IPR000812 GO:0006352|GO:0070897
Lal23g1398 499 PRINTS Transcription initiation factor IIB signature 270 286 IPR000812 GO:0006352|GO:0070897
Lal23g1398 499 PRINTS Transcription initiation factor IIB signature 302 316 IPR000812 GO:0006352|GO:0070897
Lal23g1398 499 MobiDBLite consensus disorder prediction 441 484 - -
Lal23g1398 499 SUPERFAMILY Cyclin-like 233 331 IPR036915 -
Lal23g1398 499 MobiDBLite consensus disorder prediction 381 420 - -
Lal23g1398 499 PANTHER PLANT-SPECIFIC TFIIB-RELATED PROTEIN 1 1 494 - -
Lal23g1398 499 MobiDBLite consensus disorder prediction 395 420 - -
Lal23g1398 499 Coils Coil 428 448 - -
Lal23g1398 499 Pfam Transcription factor TFIIB repeat 137 218 IPR013150 GO:0017025
Lal23g1398 499 Pfam Transcription factor TFIIB repeat 235 316 IPR013150 GO:0017025
Lal23g1398 499 CDD CYCLIN 137 218 IPR013763 -
Lal23g1398 499 SUPERFAMILY Cyclin-like 136 226 IPR036915 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1398 K03124 - gmx:102662353 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1398 23 14583518 14587434 Lal23g1398 23 14583518 14587434 ECH