Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1393 ATGGATCCTCACAAAGCTTCCTTAGCTTCTTCATTTTGGTTGGTGTTAACCATCTTCCTTACAATATCATTGCATGGGGTGAATACATCAAGTGAGGTGCACCATGTTACACCTCATGTGGGACCTTTGGTGGAGAAGGATCAGAGAAGGACATTATTTGACACTGAATATGGAGAGATATCTTCCATTGACATCAAGGGTGGATATAGAGCACCATTCTATCATCTTCAGTTTTTTACATTGGAGCCAAACTCTGTGTTTCTTCCTGTGCTTCTCCATGCAGATATGGTCTTTTATGTCCACACAGGGAGTGGAAGGGTGACTTGGACAGTTGAAAATGGTGGTACTAGGAGGAGTGATTTGCGTGAAGGAGATCTATTCAAGCTCAATGAAGGAAGTGTTTTCTATATAAACAGCAACTTGGAGGAGGATAGAAAGAAACTTAGGATTTATGCAATGTTTGCCAACACAGACGATACCACTTATGATCCATCAATCGGTGCATACTCAAGGATCAATCAACTGGTCAATGGTTTTGATATGAAAATCATTCAAGCAGCTTTTAAGGTGCCGGAGGATTTGATTGAAGCAATCACAAACAAGACCGAGACACCAGCTATAGTGCATGCAAACTCAGAGGAGCATAAAACATTATGGGAATTAGAGGCTTCAGTTCTTAATGACTTCTTAGGCATTCCGTCCAATGGCAAGAAAGGCAAAACATATAACATCTTTGATAAAGACCCTGATTTCAAAAACTGTCATGGTTGGAGCCTAGCAGTGACCAAAAAGAAGCTAAAATCATTGAAGGGTACCAACATTGGATTTCTAATGGTGAATTTGACCACGGGGTCAATGTTGGGTCCACATTGGAACCCAACTGCAAGAGAGATAGTAGTGGTACTTGAAGGGGAAGGCATGGTCCGAGTAGTTTGTGCGAGCAGCAATAATACTGAGTCCAAGAAGGAAGAATGCACGAACATGAGGTTTAGAGTTAAGGAAGGAGATGTTTTTGTGGTGCCAAGGTTTCATCCAATGGCTCAGATGTCATTCAACAATGATTCACTCGTTTTTCTGGGGTTCAGCACTGCAGCAAAGGAAAACTATCCTCAGTTTTTAGCTGGAAAAAGATCAGTTCTTGGAGCTCTAGACAGACAAATATTGGCCACCTCTTTTGGTGTGAGTAACACAACCATTGACCAGCTGTTTGCTTCTCAGGACGATTCCATCATTTTCGGGTGTGTTTCATGTGCTGAGGAAGAGGAAAGGATGATGGAGGAAGAAGAGAGGAAAAGAGAAGAAGAGAAAGAAAGGAGAAGAGAAGAGGAGGAAGAAGAAGAAGAACAAGAGAGGGAGCAAGAAAGAGCTAGAAGAGAAGAAGAAGCAAAAAGGGAGGAAGAGCACCCAAGAAGGCAACAGGAAAAGAGGGAGAGGAGAAGAGAAGAAGAAGAAGATAGGAGAGAGCATAAAAAGGGAAAAGAGGAAGAAGAAGAAGAAGAAGGTGAGAGGGAGAGAGGAGGAGGGGTGAGGCCACATAGAAGGGGAGACAAGGGAAGAAGCCGAGAAGAAGGAGGAGCAGAATGGGAGCAAGAAGAAGCAAGAAGACAGCAAGAACAGAGGGAAAGGAGAAGGGAGCAAGAAGGTGATGAAGTCGAGGACAAAGGTAATAGGAGCAGCTTTTAA 1683 0.4302 MDPHKASLASSFWLVLTIFLTISLHGVNTSSEVHHVTPHVGPLVEKDQRRTLFDTEYGEISSIDIKGGYRAPFYHLQFFTLEPNSVFLPVLLHADMVFYVHTGSGRVTWTVENGGTRRSDLREGDLFKLNEGSVFYINSNLEEDRKKLRIYAMFANTDDTTYDPSIGAYSRINQLVNGFDMKIIQAAFKVPEDLIEAITNKTETPAIVHANSEEHKTLWELEASVLNDFLGIPSNGKKGKTYNIFDKDPDFKNCHGWSLAVTKKKLKSLKGTNIGFLMVNLTTGSMLGPHWNPTAREIVVVLEGEGMVRVVCASSNNTESKKEECTNMRFRVKEGDVFVVPRFHPMAQMSFNNDSLVFLGFSTAAKENYPQFLAGKRSVLGALDRQILATSFGVSNTTIDQLFASQDDSIIFGCVSCAEEEERMMEEEERKREEEKERRREEEEEEEEQEREQERARREEEAKREEEHPRRQQEKRERRREEEEDRREHKKGKEEEEEEEGERERGGGVRPHRRGDKGRSREEGGAEWEQEEARRQQEQRERRREQEGDEVEDKGNRSSF 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1393 560 MobiDBLite consensus disorder prediction 424 439 - -
Lal23g1393 560 Pfam Cupin 78 190 IPR006045 -
Lal23g1393 560 Pfam Cupin 242 398 IPR006045 -
Lal23g1393 560 PANTHER OS03G0336100 PROTEIN-RELATED 8 454 - -
Lal23g1393 560 Gene3D Jelly Rolls 41 225 IPR014710 -
Lal23g1393 560 MobiDBLite consensus disorder prediction 424 560 - -
Lal23g1393 560 CDD cupin_7S_vicilin-like_N 52 218 - -
Lal23g1393 560 SMART Cupin_1_3 242 400 IPR006045 -
Lal23g1393 560 SUPERFAMILY RmlC-like cupins 50 408 IPR011051 -
Lal23g1393 560 Coils Coil 479 500 - -
Lal23g1393 560 MobiDBLite consensus disorder prediction 451 560 - -
Lal23g1393 560 Coils Coil 415 466 - -
Lal23g1393 560 CDD cupin_7S_vicilin-like_C 249 409 - -
Lal23g1393 560 Gene3D Jelly Rolls 234 415 IPR014710 -
Lal23g1393 560 PANTHER PREPROMP73 8 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1393 Lal-Chr23 14568503 14570763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1393 14 421 Miscellaneous Gene Families AT2G18540 48.148 1.19e-120 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1393 - - lang:109348682 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1393 23 14568503 14570763 Lal23g1393 23 14568503 14570763 ECH
Lal16g0183 16 1092369 1096483 Lal23g1393 23 14568503 14570763 LSH