Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1262 ATGACGGTTTCTTCAGCGAATTCCGTCGACGATAGTACTTGTCGCTTACTACCGTCATGTTGTGGCAGCATCAAAAGTTCTCTCATCAAACTTGCTCCACTTGAAGCAGTGCTGTTTGATATTGATGGAACTCTTTGTGATTCTGATCCATTCCACTACCAGGCCTTCCGTGTGATGCTCCAAGAGATTGGTTTCAATGGAGGTGTTCCTATAACAGAGGAATTTTTTATTGCATTTGCTGCTGGCAAGCACAACGATGATGTTGCATTGGCTCTCTTTCCTGATGACATTGAACGAGGTTTAAAGTTTCTAGAGGATAAGGAAGCCATGTTCCGGAAATTGGCTGCAGAGCAAGTGAAGGCTTTGAGTGGTCTTCATAAAGTGAGGAAATGGATTGAAGATCGTGGGTTGAAGCGGGCTGCTGTTACCAATGCTCCAAGACCAAATGCAGAACTCTTGCTCTCAAAACTTGGTCTCTCAGATTTTTTTGAAGCTGTTATTATTGGTGATGAATGTGAACATGCCAAACCACATCCAGATCCCTACTTGAAAGGTCTTGAAGTTCTAAAGGCATCAAAGGATCACACACTTGTATTTGAGGATTCTGTTTCAGGGATCAAGGCTGGAGTAGCAGCTGGGATGCCTGTTATAGGTTTAGCAACCCGAAACCCAGAACATTTATTGATGGAAGCCAAGCCTGCTTTTCTGATTAAGGATTATGAGGATCCAAAATTGTGGGCAGCTTTGGAAGAACTGGACAAGGCTGGTGCACATTAA 777 0.435 MTVSSANSVDDSTCRLLPSCCGSIKSSLIKLAPLEAVLFDIDGTLCDSDPFHYQAFRVMLQEIGFNGGVPITEEFFIAFAAGKHNDDVALALFPDDIERGLKFLEDKEAMFRKLAAEQVKALSGLHKVRKWIEDRGLKRAAVTNAPRPNAELLLSKLGLSDFFEAVIIGDECEHAKPHPDPYLKGLEVLKASKDHTLVFEDSVSGIKAGVAAGMPVIGLATRNPEHLLMEAKPAFLIKDYEDPKLWAALEELDKAGAH 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1262 258 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 34 242 - -
Lal23g1262 258 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 34 242 - -
Lal23g1262 258 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 25 255 - -
Lal23g1262 258 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN-CONTAINING PROTEIN SGPP 25 255 - -
Lal23g1262 258 Gene3D - 35 243 IPR023214 -
Lal23g1262 258 Gene3D Putative phosphatase; domain 2 49 117 IPR023198 -
Lal23g1262 258 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 112 218 IPR006439 -
Lal23g1262 258 Pfam Haloacid dehalogenase-like hydrolase 37 218 IPR041492 -
Lal23g1262 258 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 34 45 IPR006439 -
Lal23g1262 258 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 132 145 IPR006439 -
Lal23g1262 258 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 163 179 IPR006439 -
Lal23g1262 258 CDD HAD_BPGM-like 36 221 - -
Lal23g1262 258 SUPERFAMILY HAD-like 31 251 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1262 Lal-Chr23 13724281 13726590 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1262 - - cam:101496926 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1262 23 13724281 13726590 Lal23g1262 23 13724281 13726590 ECH