Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1252 ATGAACAGAGAAGGTGGAAGAGATGTTGGTGTTGATCGAAGGAATCGAATCAACGAGGATCTTAACAAATCCTCCACTAACGTTTCTACCTCGAAGCCAATCAAATTCATATTTCCCAATAACACTCATTCTAACAACACCAACGCTTCTCTTTCTCATGAGGAATCTGAAACAGATAGTGAAGAATCAGAGGTTAGTGGTTCTGATGATGACACACCTTGGATCTCATGGTTTTGCAATCTTAGAGGAAATGAATTCTTTTGTGAGGTTGATGATGATTACATACAAGACAATTTCAACCTCTGTGGATTAAGCAGTCAAGTGCCTCACTATGATTATGCGCTTGATTTGATTTTGGATGTTGATTCCTCCCATGATTTTGGCTATATCAGTAGGACTAACTTTGCATTAGATGCGATAGTGGCGGTTGAACCCAGAGTTGGTGGTGCTTGCACGTGTCAAGTGACAGTGACGACCCTATTCATGAAGTTGCAACTCAGGGGAAGAAATACATTATACAGTTTTGGGCCTCTGATACCTTCATTGTTTGGAATGGCTTTGGAATCAGATGAAATGCTCACAAAGGAAGAAAATGAGGAAATTGAATCAGCTGCTGGGATGCTCTATGGTTTGATTCATGTCCGGTACATCTTGACAAGCAAAGGAATGTCAGCCATGCTGGAGAAATACAAGAACTATGACTTTGGTAGATGTCCAAGAGCTTACTGTTCAGGGCAACCTTGTCTTCCAGTTGGTCTGTCAGACATCCCTGGGTCAAGTACTGTGAAACTATATTGCCCCAGGTGTGAAGACGTTTACAACCCTCAGTCGAAGTATCATAATGTTGATGGAGCTTATTTTGGAACCACATTTCCTAACCTCTTCTTAATGACTTATGGGCATCTGAAGCCGCAAAAGCCGACACAAAGATACATTCCTAGAGTTTTTGGTTTTAAAGTTCACAAGCCATGA 972 0.4126 MNREGGRDVGVDRRNRINEDLNKSSTNVSTSKPIKFIFPNNTHSNNTNASLSHEESETDSEESEVSGSDDDTPWISWFCNLRGNEFFCEVDDDYIQDNFNLCGLSSQVPHYDYALDLILDVDSSHDFGYISRTNFALDAIVAVEPRVGGACTCQVTVTTLFMKLQLRGRNTLYSFGPLIPSLFGMALESDEMLTKEENEEIESAAGMLYGLIHVRYILTSKGMSAMLEKYKNYDFGRCPRAYCSGQPCLPVGLSDIPGSSTVKLYCPRCEDVYNPQSKYHNVDGAYFGTTFPNLFLMTYGHLKPQKPTQRYIPRVFGFKVHKP 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1252 323 SUPERFAMILY Casein kinase II beta subunit 72 131 IPR035991 GO:0005956|GO:0019887
Lal23g1252 323 MobiDBLite consensus disorder prediction 1 20 - -
Lal23g1252 323 ProSitePatterns Casein kinase II regulatory subunit signature. 238 269 IPR000704 GO:0005956|GO:0019887
Lal23g1252 323 Gene3D - 235 308 - -
Lal23g1252 323 MobiDBLite consensus disorder prediction 21 53 - -
Lal23g1252 323 MobiDBLite consensus disorder prediction 1 70 - -
Lal23g1252 323 Pfam Casein kinase II regulatory subunit 74 319 IPR000704 GO:0005956|GO:0019887
Lal23g1252 323 PRINTS Casein kinase II regulatory subunit family signature 73 89 IPR000704 GO:0005956|GO:0019887
Lal23g1252 323 PRINTS Casein kinase II regulatory subunit family signature 90 104 IPR000704 GO:0005956|GO:0019887
Lal23g1252 323 PANTHER CASEIN KINASE II SUBUNIT BETA 190 322 IPR000704 GO:0005956|GO:0019887
Lal23g1252 323 PANTHER CASEIN KINASE II SUBUNIT BETA 14 126 IPR000704 GO:0005956|GO:0019887
Lal23g1252 323 SMART CK_II_beta_2 73 319 IPR000704 GO:0005956|GO:0019887
Lal23g1252 323 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 66 234 IPR016149 GO:0005956|GO:0019887
Lal23g1252 323 PANTHER CASEIN KINASE II SUBUNIT BETA-2 14 126 - -
Lal23g1252 323 PANTHER CASEIN KINASE II SUBUNIT BETA-2 190 322 - -
Lal23g1252 323 SUPERFAMILY Casein kinase II beta subunit 175 322 IPR035991 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1252 Lal-Chr23 13648055 13651221 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1252 K03115 - jre:108983092 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1252 23 13648055 13651221 Lal23g1252 23 13648055 13651221 ECH