Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1246 ATGAGTAACACTCATGCTGCAATAAACAAGTTGAACAATTTGTCAAGAAGGTATATCCACTCCCTGAGCCAAACACCCCACAGGCTTAAGAAAAGAATGCTAGCCACATGGACCCCAGATGAGGAACTTAACCAAGTGAGGGAAAGGTCTGGTGCAGACATGAAAAGGAAGCTGAATTGGTATGAGCTTATTGCTCTTGGAATAGGAGGAATGCTTGGTGTTGGAGTCTTTGTCACAACTGGTTCTGTTGCTCATCATCACTCTGGTCCTTCAGTTTTCATATCTTATATCATTGCTGGAATATCAGCCCTTCTCTCCTCTCTTTGTTACACTGAATTTGCTGTTCAAATCCCTGTTGCTGGAGGAGCTTTCAGTTATTTAAGATTAACCTTTGGAGAATTCGTGGGATATTTTGCCGGGGCAAATATACTAATGGAGTATGTGTTCTCAAACGCTGCAGTATCAAGAAGTTTTACTGAATATTTGAGCTTTGCATTTGGAGAAAATGACCCAAATGTGTGGAGAGTGGAAGTGCATGGATTGCCAGAGGAATATAACATGTTGGATTTCCCAGCTGTGGCTCTTATCCTCCTTCTCACTCTCTGCTTATGTTATAGTACTAAGGAAAGCTCCATGTTGAACCTCATCATGACAGTTTTCCATGTGATTTTCTTTGGATTCATCATTGTTACTGGTTATTGCAAAGGAAGTGCCAAAAACTTGGTTAGTCCAAAAGGAATAGCTCCTTTTGGTGTAAGAGGTGTTCTTGATGGAGCAGCAATAGTATACTTCAGCTATATAGGCTATGATTCTGCATCAACCATGGCAGAGGAGATCAGAGATCCTTCAAAGAGCTTGCCAATTGGAATTGTGGGTTCAGTTCTTATAACCACTGTGCTTTATTGCCTAATGGCACTGTCTTTGTGTATGATGATTCCTTACAACGAGGTATCAGATAGAGCATCATTTTCAATTCCATTCCTTAAGATTGGATGGAGGTGGGCGAGTAACCTTGTGGGAGCAGGTGCAAGTTTGGGGATAGTGGCTTCTCTATTGGTTGCAATGTTAGGTCAAGCTAGATACCTTTGTGTTATAGGAAGGGCTCGCCTGGTGCCATCTTGGTTAGCCAAAGTGCACCCTTCAACTGGCACCCCATTGAATGCCACACTCTTTTTGGGACTTTGCACAGCGCTCATCGCGCTTTTCACCGAGCTTGACATTATAATTGAGTTGGTTAACATAGGCACACTCATGGTGTTCTACCTTGTGGCCAATGCTCTCATATACCGTCGGTATGTAGTCACTCAACATACGCCACCTCTGCACACTATCTTGTTCCTGCTTCTCCTTTCTCTTACTGCTATAGGCTTCTCCATGTCGTGGAAATTCAAGCAACAATGGTGGGGTATGCCACTCTTTGGAGGGCTCATGATCGCAGTCACCACTTTTTTCCAACACATGGTGCCTAGCCATGCCCAAGTTGCTGCTGATTGGTCTGTGCCATTTATGCCATGGCCAGCTGCCATATCTATTTTTCTTAACGTTTTCCTCATAACAACACTGAAGCTCCTCTCTTTCCAAAGGTTTGCTATATGGACATGTCTCATTACCATCTTCTATGTCCTTTATGGTGTTCACTCCACTTATAGAGCAGAGGAGATAGAGATGGGTGTCAATGAAGTTAGTTCAAGCACAGCTAACTTACAAACTAAGGTAGAACTTGAACTGCTTTAG 1734 0.4302 MSNTHAAINKLNNLSRRYIHSLSQTPHRLKKRMLATWTPDEELNQVRERSGADMKRKLNWYELIALGIGGMLGVGVFVTTGSVAHHHSGPSVFISYIIAGISALLSSLCYTEFAVQIPVAGGAFSYLRLTFGEFVGYFAGANILMEYVFSNAAVSRSFTEYLSFAFGENDPNVWRVEVHGLPEEYNMLDFPAVALILLLTLCLCYSTKESSMLNLIMTVFHVIFFGFIIVTGYCKGSAKNLVSPKGIAPFGVRGVLDGAAIVYFSYIGYDSASTMAEEIRDPSKSLPIGIVGSVLITTVLYCLMALSLCMMIPYNEVSDRASFSIPFLKIGWRWASNLVGAGASLGIVASLLVAMLGQARYLCVIGRARLVPSWLAKVHPSTGTPLNATLFLGLCTALIALFTELDIIIELVNIGTLMVFYLVANALIYRRYVVTQHTPPLHTILFLLLLSLTAIGFSMSWKFKQQWWGMPLFGGLMIAVTTFFQHMVPSHAQVAADWSVPFMPWPAAISIFLNVFLITTLKLLSFQRFAIWTCLITIFYVLYGVHSTYRAEEIEMGVNEVSSSTANLQTKVELELL 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1246 577 PIRSF AA_transporter 492 567 - -
Lal23g1246 577 PIRSF AA_transporter 35 492 - -
Lal23g1246 577 Pfam C-terminus of AA_permease 498 547 IPR029485 -
Lal23g1246 577 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 16 561 - -
Lal23g1246 577 Gene3D Amino acid/polyamine transporter I 53 493 - -
Lal23g1246 577 Pfam Amino acid permease 58 478 IPR002293 GO:0016020|GO:0022857|GO:0055085
Lal23g1246 577 PANTHER CATIONIC AMINO ACID TRANSPORTER 7, CHLOROPLASTIC-LIKE 16 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1246 Lal-Chr23 13616816 13622393 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1246 145 552 Organic Solute Cotransporters AT3G10600 50.358 5.55e-142 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1246 - - gmx:100790787 939.102