Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1222 ATGGCGGAAGCAATCGGAGGAGCGTCGTGTATTTTCTGTGATATTGCCACCAATTCCACCTCCACTCCTCTTCTCCATTCCGATGATAAGGTTGTCGCTTTCCACGACATTAATCCTTCTGCTTTCAGGCATTACTTAGTAATTCCCGTGGAGCACATTCCCACTGTTAATGATCTCCACGCAAAAGCTGAACACTATTCTTTGGTGAATCACATGTTAGAGGTGGGGAGAACGTTATTACATAGAGATGCACCTCAATCCAACCACTACAGATTTGGTTTTCATCAACCTCCATTTAACTCTGTTAACCACCTACACCTCCACTGTTTTGCGCTACCCTATACACCAAGATGGAGATGTATAAAATACATGTCATTTGGACCACTTGGTTTCATTGAAGCAGAGAAGTTTCTGGAAAAGATAAAGCCTTTCTCCTCAGTTCACTCTAAAGTATAA 456 0.4232 MAEAIGGASCIFCDIATNSTSTPLLHSDDKVVAFHDINPSAFRHYLVIPVEHIPTVNDLHAKAEHYSLVNHMLEVGRTLLHRDAPQSNHYRFGFHQPPFNSVNHLHLHCFALPYTPRWRCIKYMSFGPLGFIEAEKFLEKIKPFSSVHSKV 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1222 151 Gene3D - 12 151 IPR036265 -
Lal23g1222 151 ProSiteProfiles HIT domain profile. 11 119 IPR011146 GO:0003824
Lal23g1222 151 SUPERFAMILY HIT-like 9 131 IPR036265 -
Lal23g1222 151 PRINTS Histidine triad family signature 11 27 IPR001310 -
Lal23g1222 151 PRINTS Histidine triad family signature 32 50 IPR001310 -
Lal23g1222 151 PRINTS Histidine triad family signature 100 110 IPR001310 -
Lal23g1222 151 Pfam Scavenger mRNA decapping enzyme C-term binding 9 117 - -
Lal23g1222 151 PANTHER APRATAXIN-RELATED 8 142 - -
Lal23g1222 151 PANTHER HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 3 8 142 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1222 K22966 - jre:108985353 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1222 23 13453846 13455855 Lal23g1222 23 13453846 13455855 ECH