Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1208 ATGACTATGGAGTGGCATGCTTCTACAGATGAATACGAAAAACTCATAAATCGAATGAGTACCCCCAGGGTCGTTATTGACAATGCCGTTTGTTCCACCGCGACTCTGGTCAAGGTTGATAGTGCTAGAAGGCATGGTATTCTCTTGGACGCTGTAGAAGTGCTTACTGACCTCAACCTCTTAATTAAGAAGGGCTACATTTCCTGTGATGGAAGGTGGTTCATGGATGTTTTCCATGTTACTGATCAAAACGGAAACAAGCTAAAAGATGAGAGTGTTTTGAAATATATAGAACAGTCACTTGGGAGCATTCATGTTAGTAGAACCAATGGCTCAAATGGTTTGACTTCACTGGAGTTAACCGGAACTGACAGAGTTGGTCTTCTATCAGAGGTGTTTGCTGTACTGACTGATCTGCAATGCGATGTCGTTGAGGCTAAGGTTTGGACTCACAATGGCCGCATTGCCTCTGTAATCTACTTAAGGGACTGCGATTCTGGGTCCACTATTGAGGACTTTCAGAAAATTGATAGAATTGAAGCGCGTTTAAGAAATATTTTGAAGGGAGACAATGACTTTAGAAGTGCTAAAACCTCTGTGTCCATGGCTGCCATGCACACTGAAAGAAGGCTGCATCAAATGATGTTCACTGACTGTGATTATGATAGGAATCCTATTTTAAAGTTTACTTCTGATCCCCCAGTAGTGATTGTTCAGAATTGGGCAGAACGGGGTTACTCAGTTGTCAATATTCGATGCAAGGATCGAATCAAGCTATTATTTGATGTTGTATGCAATTTAACAGAAATGGAATATATTGTGTTTCATGCAACTATCAACACTGATAATGACCAAGCAAACCTGGAATTTTACATAAGACATAAGGATGGCACCCCAATTAGTTCAGAATCAGAGCGTCAACGTGTAATTCAATGCTTAAAGGCTGCTGTGGAGCGAAGGGCATCTGAGGGTGTTCGACTTGAGTTATACACGAGAGACGAGCAGGGGCTTCTAGCAGGTGTAATGAGAACTTTCCGAGAGAATGGACTGAATGTAATGAGGGCTGAGGTATCCACCAGGGGTAATATGGCTGCAAATGTGTTCTATGTAACAGACGTGATTGGAAACCCGGCTGATCCAAAAATCATCGAATCTGTAAGGCATAAAATTGGATTAAGCAATTTAGAAGTGAAGGAGTTGCCGTCGATATGTCATCATCAGAAGGAAGATGGAGAGGATCAAGCAATTGGAGTTGGTGGTGCAGTGTTGATGTTTATTGGTAACCTCTTGAGAAGGAATCTATACAATATGGGACTAGTCAAATCCTGTTCCTAA 1335 0.418 MTMEWHASTDEYEKLINRMSTPRVVIDNAVCSTATLVKVDSARRHGILLDAVEVLTDLNLLIKKGYISCDGRWFMDVFHVTDQNGNKLKDESVLKYIEQSLGSIHVSRTNGSNGLTSLELTGTDRVGLLSEVFAVLTDLQCDVVEAKVWTHNGRIASVIYLRDCDSGSTIEDFQKIDRIEARLRNILKGDNDFRSAKTSVSMAAMHTERRLHQMMFTDCDYDRNPILKFTSDPPVVIVQNWAERGYSVVNIRCKDRIKLLFDVVCNLTEMEYIVFHATINTDNDQANLEFYIRHKDGTPISSESERQRVIQCLKAAVERRASEGVRLELYTRDEQGLLAGVMRTFRENGLNVMRAEVSTRGNMAANVFYVTDVIGNPADPKIIESVRHKIGLSNLEVKELPSICHHQKEDGEDQAIGVGGAVLMFIGNLLRRNLYNMGLVKSCS 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1208 444 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 3 442 IPR040217 -
Lal23g1208 444 ProSiteProfiles ACT domain profile. 326 402 IPR002912 -
Lal23g1208 444 CDD ACT_ACR_3 246 320 - -
Lal23g1208 444 ProSiteProfiles ACT domain profile. 117 201 IPR002912 -
Lal23g1208 444 SUPERFAMILY ACT-like 322 391 IPR045865 -
Lal23g1208 444 SUPERFAMILY ACT-like 113 187 IPR045865 -
Lal23g1208 444 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 3 442 - -
Lal23g1208 444 SUPERFAMILY ACT-like 31 103 IPR045865 -
Lal23g1208 444 CDD ACT_ACR_1 34 105 - -
Lal23g1208 444 Gene3D - 115 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1208 Lal-Chr23 13367718 13370745 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1208 - - gmx:100806283 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1208 23 13367718 13370745 Lal23g1208 23 13367718 13370745 ECH