Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1199 ATGGCAGAGTCGTCGTCTTCCCCTTTTAACATGGATCATCATCATCATGATCAACAACAACACGAGGAACTACAACACCACCAAGAAGAAACAGTGAAAGATTTAATTCACAAAACCAAAACGATTCAATTCCTTGGACGCACCACTCCTATCGTTCTCCAAAACGACAATGGTCCTTGTCCTCTCCTCGCTATATGTAACATTCTTCTTTTACGAAACAACTTAAATTTGAGTCCAGATATTCCTGAAGTCTCTCAGGAGAAATTGCTTTCATTGGTTGCTGAAAGACTAATTGACTCCAATGCTAATGTGAATAACAAAGATGCTGGCTATGTTGAAAATCAACAACAGAACATTGCCGATGCAATTGATTTGCTCCCTAGGCTTGCTACTGGCATTGATGTAAATATAAAATTCAGGAGAATAGATGATTTTGAGTTCACTCGAGAGTGTGCCATATTTGATCTGCTGGACATCCCTTTGTATCATGGGTGGATAGTCGATCCTCAGGATTATGATACTACAAATGCAATAGGATCAAAGTCCTATAATGCCCTCATGGAAGAGCTTGTTTCTCTTGAAACACTAAACATGGAAGTCCAACATAAAAGTAATCTGGAAGAAGATTCTGTTGATTTTGTGGCAGCAACAACAGCTGCTCTTGGAATTCCTTCTCCCAGCCTTTCAATAGCAAAGTCGTTTGATGATTATCCAGATTCTGTTTCAGATGAAATAGCAAGAAAAGGCGATCGTGAAGAAGAGGAAGAATTTTTGAGAGTTTTGAAGCTGTCTGAGAATGATTCTAAAGTTTCAGCAAGTGATCCGATCGTAGGTCATGCAAATGGGGGAGCAATTTTTGTTAGTGTGGATGATAGTATGTGTAACAAGCAGGTTATATCTGTGGATTCTGGAGATAGATTAGAAAAAAGCACTGGTGCTGGCAAAAATGACTTTCCTGAGGTTGCTGAAACTTCCATATCAGATGATTACACTGTTTCTGTCAAAAACAGGGATGATCAGACATCTTCTGCATCTATAATGGGAGAAGCTGTTAATTCATCCTTAAAGACTGATGCCATAAATGACCATCAATCAGCTCATATGGGACCTGAAGAGTCTAATGGCCAGAATGATGTGACTGAGAATGTTCGTCTTGATGCATTGGTTCAGAATGAGGGTGCAGCTATACTTTCTCCTGGAGAACACTCTGTCTCTTTGTCTGAGAGCTGTGCAGATGTCTCTGGAAGGGCTGCGAAAATTCAAGATCAACCCACTCTCAAAACTACTGACCATGAAGTCATAGATGGTTCTCAAGGTTCCGTAAGCAATACAAATTCAGATCTGTCTGGTGAAATATTTCCTCAAACTGATGTCTCTAGCACATTACCTTCTAGTGTTGATGGTAGTGAGCCCATATATGAAGGAGAAGAATGTGTATTAGATACAAGAACGCAAAATGTTGGAGATTGTGAACCTGTCTATGAAGGTGAGGTGGTGCTTGCAGAACAAGCTGAGAAAAGCACCTTAGCTGCCCCTGATCTAAGAGCTAAGGATGAAATTACTCCACAACAAGGGGAATTGATCAAGACTTTCTTGAGGAATAATGCTAGTCAGTTGACATTTTACGGCCTCTTCTGTTTACAAGATGGTCTTAAAGAGCGTGAGATATGTGTTTTTTTCCGGAACAATCATTTCAGCACCATGTTTAAGTTTGAGGGTGAGCTATATCTTCTAGCTACAGACCAAGGTTACATAAATCAGCCTGATCTAGTGTGGGAAAAATTGAATGAGGTGAATGGTGATACATTGTTTATGACCAGTAACTTCAAGGAATTCAAGGTAGAAGAGAGCCACGAAAGTAACACCTGGGATGAGAACAATGCTATGACCAGCACCACTGACTATCTTGCCAGCATTGATAGTGCATCGCAGGCAGGCTTAGATATCAATTCTGATCTGCAATTAGCAATAGCCTTACAGCAACAGGAGTTCGAACAACAGCCGCCACCCCGTCATACTTCACAGCAATCATCATCTATTAGTGGTGGCTCCAGACTGGTCACAGGTCCTCAGGTGGCAGGGAACACTAGTAGGCATTCATCTTCATCCCCTAAACCTGATGGAAAATCGAAAGAAAAATGTACAGTGATGTGA 2154 0.409 MAESSSSPFNMDHHHHDQQQHEELQHHQEETVKDLIHKTKTIQFLGRTTPIVLQNDNGPCPLLAICNILLLRNNLNLSPDIPEVSQEKLLSLVAERLIDSNANVNNKDAGYVENQQQNIADAIDLLPRLATGIDVNIKFRRIDDFEFTRECAIFDLLDIPLYHGWIVDPQDYDTTNAIGSKSYNALMEELVSLETLNMEVQHKSNLEEDSVDFVAATTAALGIPSPSLSIAKSFDDYPDSVSDEIARKGDREEEEEFLRVLKLSENDSKVSASDPIVGHANGGAIFVSVDDSMCNKQVISVDSGDRLEKSTGAGKNDFPEVAETSISDDYTVSVKNRDDQTSSASIMGEAVNSSLKTDAINDHQSAHMGPEESNGQNDVTENVRLDALVQNEGAAILSPGEHSVSLSESCADVSGRAAKIQDQPTLKTTDHEVIDGSQGSVSNTNSDLSGEIFPQTDVSSTLPSSVDGSEPIYEGEECVLDTRTQNVGDCEPVYEGEVVLAEQAEKSTLAAPDLRAKDEITPQQGELIKTFLRNNASQLTFYGLFCLQDGLKEREICVFFRNNHFSTMFKFEGELYLLATDQGYINQPDLVWEKLNEVNGDTLFMTSNFKEFKVEESHESNTWDENNAMTSTTDYLASIDSASQAGLDINSDLQLAIALQQQEFEQQPPPRHTSQQSSSISGGSRLVTGPQVAGNTSRHSSSSPKPDGKSKEKCTVM 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1199 717 MobiDBLite consensus disorder prediction 9 28 - -
Lal23g1199 717 MobiDBLite consensus disorder prediction 434 467 - -
Lal23g1199 717 MobiDBLite consensus disorder prediction 664 703 - -
Lal23g1199 717 Pfam MINDY deubiquitinase 66 191 IPR033979 GO:0004843|GO:1990380
Lal23g1199 717 MobiDBLite consensus disorder prediction 434 468 - -
Lal23g1199 717 PANTHER NF-E2 INDUCIBLE PROTEIN 18 717 IPR007518 GO:0004843|GO:1990380
Lal23g1199 717 MobiDBLite consensus disorder prediction 1 28 - -
Lal23g1199 717 Coils Coil 183 203 - -
Lal23g1199 717 MobiDBLite consensus disorder prediction 664 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1199 Lal-Chr23 13312796 13319924 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1199 K01309 - gmx:100808340 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1199 23 13312796 13319924 Lal23g1199 23 13312796 13319924 ECH