Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1196 ATGGGTTTACCAAATAACGGTAGCACCGGTGAGAATCAGTTGAAGTTCTTGATCTACGGCAGAACCGGCTGGATCGGTGGTCTTCTTGGAAAACTATGTGAAGCCCAAAGCATCACTTACGTCTACGGAACCGGACGCCTAGAGGACCGGTCATCATTGGAGGCTGACATAGCGGAGGTGAAACCAAGCCACGTGTTCAACGCCGCCGGTGTAACCGGTAGACCCAATGTTGACTGGTGCGAGTCTCATAAGGTTGAAACAATAAGAACCAACGTTGTTGGGACTCTTACGTTGGCTGATGTGTGTCGCAACAAGGGTCTTATCCTTATTAATTATGCCACTGGTTGTATTTTTGAGTATGATTCTCTTCACACTCTTGGATCTGGTCTTGGATTTAAAGAAGAGGATACTCCTAACTTCATTGGATCTTTTTACTCTAAGACCAAGGCTATGGTAGAAGATCTGCTTCATGACTATGAGAACGTGTGTACTTTGAGAGTGAGGATGCCAATTTCCTCTGATTTATCAAACCCTCGCAATTTTATCACAAAGATCACTCGTTATGACAAGGTTGTGGACATTCCAAATTCAATGACAATATTGGATGAGCTCCTTCCCATTTCTCTAGAAATGGCAAAGAGAAACCTCACTGGAATCTGGAATTTCACTAACCCTGGTGTGGTAAGCCACAATGAAATTCTACAGATGTATAAGGACTATGTCGATCCCAACTTTGCTTGGAAGAACTTCACTCTTGAGGAACAGGCTAAGGTCATTGTTGCACCCAGAAGCAACAATGAGCTTGATGCATCTAAATTAAAGAACGAGTTCCCTGAACTATTGTCTATCAAGGAATCCCTCATTAAGTATGTATTCGAGCCAAATCAGATTGAGATTAAAGCTTGA 906 0.4294 MGLPNNGSTGENQLKFLIYGRTGWIGGLLGKLCEAQSITYVYGTGRLEDRSSLEADIAEVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRNKGLILINYATGCIFEYDSLHTLGSGLGFKEEDTPNFIGSFYSKTKAMVEDLLHDYENVCTLRVRMPISSDLSNPRNFITKITRYDKVVDIPNSMTILDELLPISLEMAKRNLTGIWNFTNPGVVSHNEILQMYKDYVDPNFAWKNFTLEEQAKVIVAPRSNNELDASKLKNEFPELLSIKESLIKYVFEPNQIEIKA 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1196 301 CDD dTDP_HR_like_SDR_e 15 287 - -
Lal23g1196 301 Gene3D - 5 299 - -
Lal23g1196 301 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 14 287 IPR036291 -
Lal23g1196 301 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 7 296 - -
Lal23g1196 301 Pfam RmlD substrate binding domain 15 186 IPR029903 -
Lal23g1196 301 PANTHER BNAC05G13120D PROTEIN 7 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1196 Lal-Chr23 13296507 13298529 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1196 K12451 - gmx:100787499 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1196 23 13296507 13298529 Lal23g1196 23 13296507 13298529 ECH