Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1164 ATGGCCTTGAACAACAAACCCAAGAAATCTATTTCACCTTCTCATTTTAAACTATTTATCACCCTCTTCTTCATAGTTCTCTTCACCCTGCCAGCTCTTTTCCTCCTCCACACGCCTACCGCCAACTCCATATGCACCACCCTTGCCAACAAGGCTTGGTCTGGTGATCTTAGACTAGCCGAGTTTGCATGGAATCGCCTCCCGTTTTTCGAAGACAGCCCTTCACCAATAGCTCTCAAAATTGCTGTCTTCTCTAGAAAATGGCCTATTGGCACCACCCCGGGTGGCATGGAGCGCCATGCTCACACCCTTCACACTGCTTTAGCGCGGCGTGGCCATCAAGTTCATGTCTTCACCTCTCCACCACAGGATGAAAGCATTTCAGTCTTAGCTTCAGAGACAAGCAATCATGAAGCCGGTGCACCCTCTTCACCTTACATCCATTGGCATGAAGGGGAGCCGGGTAGGTGGCGCTATAACAAAGCATGGGAACAGTTTTCTGAAGAAAACAAAAGAGAAGCTTTTGATGTTGTTCACTCAGAAAGTGTGGCACTTCCTCATTGGCTAGCACGAAAACTTCCAAATCTTGCAGTCTCTTGGCATGGCATAGCCCTTGAGAGCGTTCAATCAAGTATTTTCCAGGACTTGGCTCGCGGTCCTGATGAACCTCTATCACCTGATTTCAACAAAAGCTTACACGGGGTTATCCCTAAGGTGCTGAATGAGATAAGGTTCTTCAGGAACTATGAACATCATGTTGCTATCAGTGATAGTTGTGGTGAGATGCTAAGGGATGTGTACCAAATTCCAAGCAGAAGAGTCCATGTAATTATCAACGGTGTTGATGAGGATGACTTCAGAGAAGATGTAAAATTGGGAAAAGAATTTAGAACCAAAATTGGCATTCCAAGCAATGCAAGTTTAGTGCTTGGTGTTGCTGGAAGATTGGTTAAGGATAAAGGTCATCCTCTGCTTCATGAAGCATTTTCCAGGCTTATAACCAAGCACCCCAATGTATACTTGATTGTAGCTGGCTCTGGACCGTGGGAGAATCGGTACAAGGATTTAGGGAGCCAAGTTCTTGTTCTTGGTTCTATGAATCCTTCCATGTTAAGAGCATTTTATAATGCCATTGACATATTTGTCAATCCCACACTCAGACCACAAGGGCTTGATCTTACTCTAATGGAAGCAATGATGAGTGGGAAGCCCCTTTTGGCATCAAGGTTTCCAAGCATCAAGGGTTCTATTATTGTTAATGATGAATTTGGTTTTATGTTCTCTCCCAATGTAGAATCCTTGTTGGAAGCACTTGAGGCCGTGGTAAAGGAAGGGCAAGAGAGGCTAGCAAGGAGGGGACAGGCATGTCGCGAATATGCAAATTCCATGTTTACAGCAACAAAGATGGCATTAGCATATGAGAGACATTATGGCTTCCATTTTGGAAGGCTGTATTCTGTGTACAATGATGTTACAGTGGACAATAAAAAGAAGGAGCTCCTACTTACTGAGACTGATCAGAATTCTCAAAACAAGATTTTGGAAATAGCAAAAGGTCCTGTTTAA 1566 0.4413 MALNNKPKKSISPSHFKLFITLFFIVLFTLPALFLLHTPTANSICTTLANKAWSGDLRLAEFAWNRLPFFEDSPSPIALKIAVFSRKWPIGTTPGGMERHAHTLHTALARRGHQVHVFTSPPQDESISVLASETSNHEAGAPSSPYIHWHEGEPGRWRYNKAWEQFSEENKREAFDVVHSESVALPHWLARKLPNLAVSWHGIALESVQSSIFQDLARGPDEPLSPDFNKSLHGVIPKVLNEIRFFRNYEHHVAISDSCGEMLRDVYQIPSRRVHVIINGVDEDDFREDVKLGKEFRTKIGIPSNASLVLGVAGRLVKDKGHPLLHEAFSRLITKHPNVYLIVAGSGPWENRYKDLGSQVLVLGSMNPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLASRFPSIKGSIIVNDEFGFMFSPNVESLLEALEAVVKEGQERLARRGQACREYANSMFTATKMALAYERHYGFHFGRLYSVYNDVTVDNKKKELLLTETDQNSQNKILEIAKGPV 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1164 521 Pfam Glycosyl transferases group 1 308 453 IPR001296 GO:0016757
Lal23g1164 521 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 80 477 - -
Lal23g1164 521 PANTHER GLYCOSYLTRANSFERASE 1 477 - -
Lal23g1164 521 Pfam Glycosyltransferase Family 4 95 284 IPR028098 -
Lal23g1164 521 PANTHER GLYCOSYLTRANSFERASE 1 477 - -
Lal23g1164 521 CDD GT4_PimA-like 80 477 - -
Lal23g1164 521 Gene3D Glycogen Phosphorylase B; 291 461 - -
Lal23g1164 521 Gene3D Glycogen Phosphorylase B; 79 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1164 Lal-Chr23 13041242 13043244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1164 1 488 Glycosyltransferase AT4G19460 62.948 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1164 - - aprc:113860121 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1164 23 13041242 13043244 Lal23g1164 23 13041242 13043244 ECH