Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1159 ATGAATAAAGCGGTAGTAGTGTTGAGTAGCAGTTTCAGTTGCAGTAATAGCATCACCAAATTTGATGCGATTCCATCGCTGTTCGTGTCCACACGTTATCAACCTCATCTTCTTCATCGGAATAAGTTATTTCCTTCTCTCAGAAAAAAGCTTATATCTCGTAGTATGGCTGATTATGAAGGAAAGACAGTTACTACTGGTAGCAATGTCAGTTCTGGGAATATGATTTTTGAGCTTATTTTGGAAGATGGAGTCTTTCGATTTGACTGTTCTGTAAATGATAGGCATGCAGCGTATCCCAGTATTTCATTTGTAAATAGCAGGACTAGAGACACTCCCGTCACTAGTGACAAGGTTCCTTCATATACCCCTAATTTTCAGCGTCTTCTAGACCAGCAGGTTGTCAAACTTGAGCTGCCAATAGGTACCTCCTTCTATGGAACTGGAGAAGTTAGTGGGCAACTTGAGAGGACGGGTAAAAGAGTCTTCACTTGGAACACAGACGCATGGGGCTATGGTCCAGGAACCACCTCGTTGTACCAATCACATCCATGGGTTTTAGCTGTTCTTCCTAATGGTGAGGCACTAGGAATTCTTGCTGACACTACGAGGCGCTGTGAGATTGATTTGAGGAAAGAATCCACAATACAATTCATTGCTCCATCTTCTTATCCTGTCATCACATTTGGTCCTTTAGCTTCACCAACGGCAGTCTTGATATCTTTATCAAAAGCGATTGGAACCGTGTTTATGCCCCCAAAATGGTCATTAGGCTATCAACAATGCCGTTGGAGCTATTTATCTGATCAGAGAGTTCTGGAGGTTACAAAAACATTCCGAGAGAAGGGCATACCTTGTGATGTGATATGGATGGATATTGACTACATGGATGGTTTTCGTTGCTTTACCTTTGACAAGGAGTGTTTCCCAGATCCCAAGTCTTTAGTAAAAGACCTCCATTACAATGGTTTTAAAGCTATTTGGATGCTCGACCCCGGGATCAAGCTGGAAGAGGGTTATTTTGTATGTGATAGTGGTTCCAAGAATGATGTTTGGGTCCAAAAGGCAGATGGAGCACCTTTCATTGGGGACGTGTGGCCTGGGCCTTGTGTCTTCCCTGACTATACACAGTCAAAAGTTCGGGCATGGTGGGCAAATTTAGTTAAAGAGTTCATTTCCAATGGTGTTGATGGTATTTGGAATGATATGAACGAACCAGCTATCTTTAAGGTTGTAACCAAAACAATGCCTGAAAGCAATGTTCATAGGGGAGATAAGGAACTTGGAGGTTGTCAGAATCATTCTTTCTATCATAATGTATATGGTCTACTGATGGCAAGGTCAACGTATGAAGGCATGAAATTGGCTAATGAGAAAAAGCGCCCATTTGTCCTCACCAGAGCTGGATTTGTTGGCAGCCAAAGGTATGCTGCAACTTGGACCGGAGATAACCTTTCAACCTGGGATCATCTTCATATGAGTATCTCCATGGTACTACAGATGGGACTCAGTGGTCAGCCACTTTCAGGTCCTGATATTGGTGGATTTGCTGGAAATGCATCACCTAGGCTTTTTGGAAGGTGGATGGGCATTGGTTCCTTATTTCCCTTTTGCCGAGGGCATTCTGAAAAGAGCACCAGTGACCATGAACCTTGGTCTTTCGGGGAAGAGTGTGAAGAAGTTTGCCGATTGGCATTGAAGAGACGCTACCGTCTTATCCCACTTATATACACACTTTTTTATTTTGCTCATACAAGGGGCACTCCAGTGGCTACCCCCACTTTCTTTGCTGATCCCAAAGATCCCAGCCTTAGGAAACTTGAAAATTCATTTTTGCTTGGCCCAGTTTTAGTGTATGCAAGCACTTTACGCGACCAGGGCTTGGATAAGTTGGACTGTACTTTGCCTAAGGGTATATGGTTGAGTTTTGATTTTGGTGATGTGCATCCTGATTTGCCAGCTTTATTCTTAAAAGGTGGCTCAATTATTCCACTGGGCCTTCCTCTTCAGCATGTTGGAGAAGCTAATCCATCAGATGACTTGACACTTCTTGTTGCTTTAGATGAACACGGGAAAGCTGAAGGTTTTCTATTCGAGGATCATGGTGATGGATATGAGTTTACAAAAGGCAAATATTTATTAACACATTATGTGGCTGAACTTCAATCATCAGTTGTTACTGTGAGTGTAAACAAAACTGAAGGATCATGGGAAAGACCTAAACGCCACCTGCATATTCAATTATTATTAGGTGGGGGTGCAAAGCTTGATACACGTGGAATGGATGGAGAAGCTCTGCAAGTAACTTTGCCTTCAGAAGAGGAGGTGTCGAAGCTGGTATGTACTAGTGAGAAGCAATACAAGAAACGTTTAGAAAACACAATTCAAATTCCAGATGTAGAAGAGGTTTCTGGACCTAAGGGAGCAGAGCTTTCAAAAATTCCCATTGAATTGAAAAATAGTGAATGGGTACTTAAAGCTGTTCCGTGGATTGGGGGTAGAATCATATCCATGATGCACATTCCTACAGGAACACAATGGCTCCATAGCAGGATTGAGATCAATGGGTATGAGGAGTATAGCAGTATTGAGTATCGTTCTGCTGGATGTTCTGAAGAATACTCTGTCATAGATGTAGAACTTGAGCATGCAGGTGAGGAGGAATCTTTGGTATTAGAGGGTGATATTGGTGGAGGATTGGTTCTTCAGCGGCAGATCTATTTTCCAAAGAACGCCGCCAATGTCATTCAGATAGACTCTAGCATAATAGCCCGCAGCGTCGGAGCTGGTTCTGGAGGGTTCTCAAGGTTGGTCTGCTTAAGAGTTCACCCAACATTCAGTCTTTTGCACCCCACAGAGTCTTTTATCTCATTCACTTCAGTTGATGGATCTATCCATGAAGTCTTCCCTGAAGGTGGGGAGCAATTATTTGAAGGAAACCTTATTCCTAATGGTGAGTGGAGGCTCATTGATAAATGTCTTGGCTTGACCCTGGTCAATCGATTTAATGTTGCAGAGGTATTTAAGTGTCTTGTTCACTGGGATTTTGGCACTGTTAACTTGGAGCTTTGGTCCGAGAACAGACCTGTTTCAAAGGAATCCCCTCTCAGAATTTCCCATCAGTATGAGGTTATGAGAATTCCGTGA 3147 0.4283 MNKAVVVLSSSFSCSNSITKFDAIPSLFVSTRYQPHLLHRNKLFPSLRKKLISRSMADYEGKTVTTGSNVSSGNMIFELILEDGVFRFDCSVNDRHAAYPSISFVNSRTRDTPVTSDKVPSYTPNFQRLLDQQVVKLELPIGTSFYGTGEVSGQLERTGKRVFTWNTDAWGYGPGTTSLYQSHPWVLAVLPNGEALGILADTTRRCEIDLRKESTIQFIAPSSYPVITFGPLASPTAVLISLSKAIGTVFMPPKWSLGYQQCRWSYLSDQRVLEVTKTFREKGIPCDVIWMDIDYMDGFRCFTFDKECFPDPKSLVKDLHYNGFKAIWMLDPGIKLEEGYFVCDSGSKNDVWVQKADGAPFIGDVWPGPCVFPDYTQSKVRAWWANLVKEFISNGVDGIWNDMNEPAIFKVVTKTMPESNVHRGDKELGGCQNHSFYHNVYGLLMARSTYEGMKLANEKKRPFVLTRAGFVGSQRYAATWTGDNLSTWDHLHMSISMVLQMGLSGQPLSGPDIGGFAGNASPRLFGRWMGIGSLFPFCRGHSEKSTSDHEPWSFGEECEEVCRLALKRRYRLIPLIYTLFYFAHTRGTPVATPTFFADPKDPSLRKLENSFLLGPVLVYASTLRDQGLDKLDCTLPKGIWLSFDFGDVHPDLPALFLKGGSIIPLGLPLQHVGEANPSDDLTLLVALDEHGKAEGFLFEDHGDGYEFTKGKYLLTHYVAELQSSVVTVSVNKTEGSWERPKRHLHIQLLLGGGAKLDTRGMDGEALQVTLPSEEEVSKLVCTSEKQYKKRLENTIQIPDVEEVSGPKGAELSKIPIELKNSEWVLKAVPWIGGRIISMMHIPTGTQWLHSRIEINGYEEYSSIEYRSAGCSEEYSVIDVELEHAGEEESLVLEGDIGGGLVLQRQIYFPKNAANVIQIDSSIIARSVGAGSGGFSRLVCLRVHPTFSLLHPTESFISFTSVDGSIHEVFPEGGEQLFEGNLIPNGEWRLIDKCLGLTLVNRFNVAEVFKCLVHWDFGTVNLELWSENRPVSKESPLRISHQYEVMRIP 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1159 1048 Gene3D - 572 654 IPR013780 -
Lal23g1159 1048 PANTHER BNAA01G23630D PROTEIN 58 1045 - -
Lal23g1159 1048 Gene3D Glycosidases 250 571 - -
Lal23g1159 1048 PANTHER ALPHA-GLUCOSIDASE 58 1045 - -
Lal23g1159 1048 SUPERFAMILY Galactose mutarotase-like 104 217 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lal23g1159 1048 ProSitePatterns Glycosyl hydrolases family 31 active site. 398 405 IPR030458 -
Lal23g1159 1048 SUPERFAMILY Glycosyl hydrolase domain 589 649 - -
Lal23g1159 1048 Pfam Domain of unknown function (DUF5110) 681 749 IPR033403 -
Lal23g1159 1048 Pfam Galactose mutarotase-like 143 209 IPR025887 -
Lal23g1159 1048 Pfam Glycosyl hydrolases family 31 234 663 IPR000322 GO:0004553|GO:0005975
Lal23g1159 1048 CDD GH31_N 135 247 - -
Lal23g1159 1048 CDD GH31_glucosidase_II_MalA 247 587 - -
Lal23g1159 1048 Gene3D glycosyl hydrolase (family 31) 90 230 - -
Lal23g1159 1048 Gene3D - 660 799 IPR013780 -
Lal23g1159 1048 SUPERFAMILY (Trans)glycosidases 244 587 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1159 Lal-Chr23 13017502 13030300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1159 9 1048 Glycoside Hydrolase AT3G23640 69.837 0.0 1543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1159 - - ahf:112747544 1802.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1159 23 13017502 13030300 Lal23g1159 23 13017502 13030300 ECH