Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1158 ATGATGATTGTAAAACGCAGTGTTAACGCCAGCGTAGCCAACACTTCAATCATGACGGTGGCTACCCGTTTCTTCTCCACCATACGCAACACGGTGGAGGCTAGAGATACGGTGGTATTTGCTGCAGCAAAGGGTGGTTTATGTTTTGGTGCTCCAAACAAGTTGGGTCATTGGGTTAGAGCCCCTACTACAGTTCATGGTGTTAGTGTTGTAAGGAATGGAAGCACTTTGGCTATGTCAGAGAAAGAGAATAAGAATGATGTTGGTTCATCTTTTGAGAGTGCTAACAAGGTTGTGAGTTACTGGGGTGTTCAACCCTCTAAGGTTACAAAACCTGATGGCACAGAATGGAAGTGGAACTGTTTCAGGCCATGGGAGACTTACAAAGCAGATATTTCCATTGATCTGAACAAGCATCATGCGCCTGTGACTTTTCTGGACAAGATGGCTTATTGGACTGTCAAGGTTCTCAGATACCCTACTGATATCTTTTTCCAGAGAAGATATGGATGCCGAGCAATGATGCTTGAGACTGTAGCAGCTGTTCCTGGGATGGTAGGAGGCATGCTACTCCACTTTAAATCGCTGCGACGATTTGAGCAAAGTGGTGGTTGGATCAAGGCTCTGTTAGAAGAAGCAGAGAATGAGCGCATGCACCTAATGACTTTCATGGAAGTGGCCAAGCCAAAGTGGTATGAGCGTGCTCTAGTCATATCAGTCCAAGGAGTTTTCTTCAATGCATACTTCTTGGGATATTTGCTTTCACCTAAGTTTGCACACCGCATGGTTGGGTACCTTGAGGAGGAAGCAATACATTCCTACACTGAATTTCTCAAAGAGCTTGACAAGGGCACCATAGAAAATGTGCCTGCTCCAGCCATTGCTATTGATTATTGGCAGCTGCCACCAAACTCAACTTTGAGGGATGTTGTCGTGGTTGTCAGAGCCGATGAAGCACATCACCGCGATGTTAATCACTTCGCATCGGACATACACTATCAAGGAAGAGAGCTAAGAGAAGCTGCTGCTCCAATTGGTTATCACTAG 1047 0.4556 MMIVKRSVNASVANTSIMTVATRFFSTIRNTVEARDTVVFAAAKGGLCFGAPNKLGHWVRAPTTVHGVSVVRNGSTLAMSEKENKNDVGSSFESANKVVSYWGVQPSKVTKPDGTEWKWNCFRPWETYKADISIDLNKHHAPVTFLDKMAYWTVKVLRYPTDIFFQRRYGCRAMMLETVAAVPGMVGGMLLHFKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVISVQGVFFNAYFLGYLLSPKFAHRMVGYLEEEAIHSYTEFLKELDKGTIENVPAPAIAIDYWQLPPNSTLRDVVVVVRADEAHHRDVNHFASDIHYQGRELREAAAPIGYH 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1158 348 CDD AOX 165 332 IPR002680 GO:0009916
Lal23g1158 348 PANTHER ALTERNATIVE OXIDASE 74 348 IPR002680 GO:0009916
Lal23g1158 348 Pfam Alternative oxidase 138 328 IPR002680 GO:0009916
Lal23g1158 348 PANTHER UBIQUINOL OXIDASE 74 348 - -
Lal23g1158 348 Gene3D Alternative oxidase 96 344 IPR038659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1158 Lal-Chr23 13016453 13019573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1158 1 348 Miscellaneous Gene Families AT3G22370 68.767 0.0 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1158 K17893 - gmx:547924 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0348 15 2355742 2358001 Lal23g1158 23 13016453 13019573 LSH