Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1151 ATGGAGAAGAAAACCATAGCAAAAAAAGTGCACTGTCTAGTCCTAGCTTATCCAGGCCAAGGACATATTAATCCCATGCTTCAATTCTCAAAGTTATTACAACATGAAGGTGTGAAAGTAACACTAGCCACCACAACTTTTTACTCCAAGAACATGCAAAAGTTACCAACTTCAATTACATTTGAGACAATTTCAGATGGGTTTGACAATGGTAGAGTTGGAGTAGCAAAGAGTCTTAAGGAGTATATAGATACATTTTGGCAAGTAGGGCAACAAACTCTTGAAGAACTTATTGAAAAACTTGGTAGAAAAGGTAACCATGTTGATTGTCTTATATATGATTCATTTTTACCTTGGGGTATAGATGTTGCCAAGAAATGTGGAATAGTTGGTGCTGTTTTTCTAACTCAAACTCTAGCTGTGAGTAGCATATACTACCATTTCAACATAGGAAAGTTGCAAGTTCCAATCACAAAGCATGGAGTTTCCCTTCCTGAACTACCACAACTTCAACTTGAGGACTTGCCTTCTTTTTTCTGTAGCTATGCTGAAGATTCAATAACTCTTGATTTTCTGTCAGCTCAGTTTTCTGACATTTACAAAGCTGATTGGGTCCTCTGCAATACACTTTATGAGCTGGAAAAAGAGATGATTAATTGGACAATGATGATTTGGCCTAAACTTAGGACCATAGGACCATCAATACCATCTATGTTTATAAACAAGAGAATTGAAAATGATGAAGATTATGGTGATGCACAATTCACAAATGAAGAATGCTTGAAATGGCTAGATGATAAGCCTAAAGTATCAGTTGTTTACATTTCATTTGGGACTATGGTTGCAATCAATGATGAACAAATAGAGGAACTAGCCTATGGTTTAAAGGATAGTGGAAGTTACTTCTTGTGGGCAATTAGAGCCTCTGAACAAACTAAACTACCCAAAGGTTTTGAATTGAAGTCAGAGAAGGGCTTAGTAGTTGCATGGTGCTCCCAACTGAAAATTCTAGCTCATGAGGCTATAAGTTGCTTTGTAACACATTGTGGTTGGAACTCCAGTTTGGAAGCTCTGAGCTTAGGAGTTCCAATGATTGCAATGCCACAATGGTCAGACCAATACACTAATGCAAAGTTTATTGCAGATGTTTGGAAAATAGGAATCAGGGCTAAAGTTGATGAGAAAAAAATTGTGACAAGAGAAGTATTGAAGCATTGTATATGGGAAATAATGGATAGTGATAGAGGCAAAGAGGTGAAGAGTAATGTCATTCAATGGAAGACTTTGGCTGTTGGAGCTGTTGGTGAAGGTGGAAGTTCTCATAAAAACATTAAGGAATTCATGGATGCCTTGTTTCATTTACAAACAGCATGCAGTGAATCACAAATTGCCTCTTCATCAATCAAATAG 1410 0.3702 MEKKTIAKKVHCLVLAYPGQGHINPMLQFSKLLQHEGVKVTLATTTFYSKNMQKLPTSITFETISDGFDNGRVGVAKSLKEYIDTFWQVGQQTLEELIEKLGRKGNHVDCLIYDSFLPWGIDVAKKCGIVGAVFLTQTLAVSSIYYHFNIGKLQVPITKHGVSLPELPQLQLEDLPSFFCSYAEDSITLDFLSAQFSDIYKADWVLCNTLYELEKEMINWTMMIWPKLRTIGPSIPSMFINKRIENDEDYGDAQFTNEECLKWLDDKPKVSVVYISFGTMVAINDEQIEELAYGLKDSGSYFLWAIRASEQTKLPKGFELKSEKGLVVAWCSQLKILAHEAISCFVTHCGWNSSLEALSLGVPMIAMPQWSDQYTNAKFIADVWKIGIRAKVDEKKIVTREVLKHCIWEIMDSDRGKEVKSNVIQWKTLAVGAVGEGGSSHKNIKEFMDALFHLQTACSESQIASSSIK 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1151 469 Gene3D Glycogen Phosphorylase B; 249 432 - -
Lal23g1151 469 PANTHER GLYCOSYLTRANSFERASE 8 450 - -
Lal23g1151 469 CDD GT1_Gtf-like 13 420 IPR002213 GO:0008194
Lal23g1151 469 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 8 450 - -
Lal23g1151 469 ProSitePatterns UDP-glycosyltransferases signature. 330 373 IPR035595 -
Lal23g1151 469 Gene3D Glycogen Phosphorylase B; 15 444 - -
Lal23g1151 469 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 269 415 IPR002213 GO:0008194
Lal23g1151 469 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1151 Lal-Chr23 12961935 12966839 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1151 11 448 Glycosyltransferase AT1G05680 45.516 3.23e-138 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1151 K13691 - gmx:100781199 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1151 23 12961935 12966839 Lal23g1151 23 12961935 12966839 ECH