Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1060 ATGGATTCATTTTCCTTGACTGAATCAAAAACTTCTAGGTATTATACACAGTTTTGTTTTGTTCATGGAAGAAGAAGACAAGGCCAATGTAAACAAGTGCAAACATATTTGGTAACAATAGAAGAAACAAGGAACAGAAATTTCTCAAGCATGGATTTTAGCTTGTGTTTAAGCTCTCCAATCATTTCCACTCTTGTACATTTCCTTCTTCTTGTTTCTTTGGTTTGTCCTGTTTGTTCAACTGAAATTTTCAACTACCCACTTGCCAATGAAACTTTTAGGCCAAAGGAAGAAGTTCACAAGTTGAACATCATAATAAATCATCTGCAACAGATTAATAAGCCTGCTATTAAAACAATTCAGAGTCCTGATGGTGATATAATAGATTGTGTTGTATCTCATTTACAACCAGCTTTTGACCATCCTCAATTGAAAGGACATAAACCATTGGATCCTCCTGAAAGACCCAAAGATCAAAGCCAAATTGAAGAATTGGGTGAGAACTTTCAGCTGTGGAGCTTGTCTGGGGAATCATGCCCTGAAGGAACAATTCCAATTAGAAGAACAACAGAACAAGATATGTTAAGGGCTAGTTCTGTTAGCAGATTTGGAAGAAAAATAAGAAGACGTGTTAGAAGAGACACAAACAGCAATGGACATGAGCATGCAGTTGGGTATGTGAGTGGACAACAATATTATGGAGCAAAGGCTAGCATAAATGTGTGGGCACCAAGGGTAGCAAATCAATATGAATTCAGCTTGTCCCAAATGTGGGTCATATCTGGTTCATTTGGTGATGATCTCAACACCATTGAAGCTGGTTGGCAGGTCAGCCCTGAGCTCTATGGGGACAATTACCCTAGATTCTTTACTTATTGGACGAGTGATGCATATCAAGCAACTGGGTGCTACAACTTACTATGTTCAGGTTTTGTTCAAACTAACAATAGAATTGCAATTGGAGCTGCAATATCTCCCACTTCTTCATATGCTGGTGGACAATTTGATATTAGCTTGCTCATTTGGAAGGATCCAAAGCATGGTAACTGGTGGCTTGAATTTGGATCCGGAATCCTAGTAGGGTATTGGCCATCATTCTTGTTCACACACTTAAGGGATCATGCAAGTATGGTACAATTTGGTGGAGAAATTGTGAATTCAAGACAAACAGGGTCACACACTTCAACCCAAATGGGTAGTGGCCACTTTGCTAGGGAAGGTTTTGGAAAAGCTTCTTACTTTAGGAATATGCAAGTTGTGGATTGGGATAATAATTTAGTTCCATTGTCAAATCTCAAGGTTCTAGCAGATCACTCTAATTGCTATGATATACAAGGAGGGATAAATAATGTTTGGGGAAATTACTTTTACTATGGTGGACCAGGGAGAAATGTGAGATGTCCCTAA 1407 0.3866 MDSFSLTESKTSRYYTQFCFVHGRRRQGQCKQVQTYLVTIEETRNRNFSSMDFSLCLSSPIISTLVHFLLLVSLVCPVCSTEIFNYPLANETFRPKEEVHKLNIIINHLQQINKPAIKTIQSPDGDIIDCVVSHLQPAFDHPQLKGHKPLDPPERPKDQSQIEELGENFQLWSLSGESCPEGTIPIRRTTEQDMLRASSVSRFGRKIRRRVRRDTNSNGHEHAVGYVSGQQYYGAKASINVWAPRVANQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPRFFTYWTSDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYAGGQFDISLLIWKDPKHGNWWLEFGSGILVGYWPSFLFTHLRDHASMVQFGGEIVNSRQTGSHTSTQMGSGHFAREGFGKASYFRNMQVVDWDNNLVPLSNLKVLADHSNCYDIQGGINNVWGNYFYYGGPGRNVRCP 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1060 468 PANTHER - 53 468 - -
Lal23g1060 468 Pfam Neprosin 250 461 IPR004314 -
Lal23g1060 468 Gene3D - 242 357 - -
Lal23g1060 468 Pfam Neprosin activation peptide 119 226 IPR025521 -
Lal23g1060 468 MobiDBLite consensus disorder prediction 144 160 - -
Lal23g1060 468 MobiDBLite consensus disorder prediction 140 160 - -
Lal23g1060 468 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 53 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1060 Lal-Chr23 12343390 12347665 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1060 - - gmx:100776639 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1060 23 12343390 12347665 Lal23g1060 23 12343390 12347665 ECH