Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1056 ATGGAACAATTCGATGGAACAATTCGAAGAATGGAAGAATGGAAGGAACAAATTTCACAATTCTGGCGTTTAGCAATTGAGCAGCTTCGTCATGCTCCCCCAGCTCAGTTATACGCTGCTGCCGCTATCGTGGTTTTCACAACTCTGCTTTTTCTATCGAGGTTGTTGAAGCGTGCAAAGGCTAATACCATTGTGTTGACGGGGCTTAGTGGGAGTGGCAAAACTATTCTCTTCTACCAACTTAGGGATGGCTCTACTCATCAGGGTACTGTTACATCAATGGAACCCAATGAGGGTACTTTCGTTCTTCATGGTGAAACCACTAAGAAGGGCAAGATAAAACCTGTTCACATTGTTGATGTTCCTGGACATTCTCGTCTTCGACCCAAGCTGGATGAGTACTTGCCTCAAGCAGCTGGCGTAGTTTTTGTGGTTGATGCTTTAGACTTCTTACCAAACTGCCGTGCTGCCTCGGAGTACCTATATGACCTATTAACTAAGGGAAGTATTGTGAAGAAGAAGATTCCACTGCTTATTCTCTGCAACAAAACTGACAAAGTCACTGCTCACACCAAAGATTTTATCCGCAGACAGTTGGAGAAGGAAATTGACAAATTGAGGACATCAAGAAGTGCAATATCAGAAGCTGACGTTACAAATGAGTTCACCCTAGGGGTACCTGGAGAACCATTTTCTTTTACCCAGAGCTCTAACAAAGTTACAACTGCAGAAGCTTCTGGATTAACTGGGGAGATATCTCAGTTGGAAGAGTTTATCCGGGAATATGTAAAGCCATAG 798 0.4348 MEQFDGTIRRMEEWKEQISQFWRLAIEQLRHAPPAQLYAAAAIVVFTTLLFLSRLLKRAKANTIVLTGLSGSGKTILFYQLRDGSTHQGTVTSMEPNEGTFVLHGETTKKGKIKPVHIVDVPGHSRLRPKLDEYLPQAAGVVFVVDALDFLPNCRAASEYLYDLLTKGSIVKKKIPLLILCNKTDKVTAHTKDFIRRQLEKEIDKLRTSRSAISEADVTNEFTLGVPGEPFSFTQSSNKVTTAEASGLTGEISQLEEFIREYVKP 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1056 265 Coils Coil 196 216 - -
Lal23g1056 265 Gene3D - 56 263 IPR027417 -
Lal23g1056 265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 211 IPR027417 -
Lal23g1056 265 CDD SR_beta 62 262 IPR019009 -
Lal23g1056 265 ProSiteProfiles small GTPase Arf family profile. 55 259 - -
Lal23g1056 265 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 10 265 IPR019009 -
Lal23g1056 265 PANTHER TRANSFERRIN 10 265 - -
Lal23g1056 265 Pfam Signal recognition particle receptor beta subunit 60 240 IPR019009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1056 Lal-Chr23 12300978 12307385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1056 8 265 Miscellaneous Gene Families AT5G05670 68.846 1.82e-133 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1056 K12272 - gmx:100800572 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1056 23 12300978 12307385 Lal23g1056 23 12300978 12307385 ECH