Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1054 ATGACAAGCAACGAGTTTCGCTTTTTCTTGTCCTGCGATATCAACCTTCCCGTCACCTTCCGCATCGATCGTCTCGAAGGCAATTTGCCCCTTCCCATAAATTCAGAGAATAATGTCTCCACTGAGGGTAGAACAGCAGAGTTATATGTTGAGTGTGCATTGTACATTGATGGTGCACCATTTGGCCTTCCCACCAGAACAAGGTTGGTGTCCACAGGATCATCATATAGTTGGAATGAGCTCATCACATTGACAACTAAGTATAGAGACTTAACTGCTCAGTCACAACTCACTTTCACTGTTTGGGATGTTTCACATGGCGAGGGATTGATTGGAGGAGCCACAATTCTTCTCTTTAACAACAAAAAGCAGCTTAAAACTGGGAAGCAAAAACTTAGGCTTTGGGCAGGAAAAGAGGCAGATGGAGCATTCCCTACCAGTACACCTGGAAAGGTCCCTAGGCATGAGCGTGGGGAGTTGGAGCGATTGGAAAAGCTTGTGAATAAGTATGAGCGAGGTCAGATTCAACGTGTGGATTGGTTGGATCGCCTCACATTTAAGACTATGGAGAGAATCAAGGAACGTGAAAGTTTGAAAAATGGAAATTCTCACTTGTACCTGGTTGTAGACTTCTGTAGTTTTGAGCATCAAGTTGTTTTTCAGGAATCAGGTGCAAATTTTCTGTTCCCATCTCCTATAGCTTCAACGAATGACATTGTTATTGTCTGGGACCCAGAAATGGGAAAGATAAATCCTTCTGAGCACAAACAGTTAAAGCTGGCTAGGAGTTTGACCCGTGGGGTCATAGACAGAGATCTGAAGCCAAGCTCAAATGAGAGAAAGTCCATTCAGAGAATACTAAAATATCCACCAACAAGGACTTTGAATGGAGATGAGCGGCAGCTTTTGTGGAAATTCCGCTTTTCTTTGATGTCTGAAAAAAGGGCTCTCACAAAGTTCCTTCGTTGTGTTGAATGGAGTGATGTTCAGGAAGCAAAACAAGCACTAGAATTAATGGGCAAGTGGGAAATGATTGATGTCTGTGATGCACTGGAACTTTTATCTCCTGTTTTTGAAAGTGAAGAGGTCCGTGCTTATGCTGTTAGTGTCCTTGAGAGAGCTGATGATGAAGAGCTTCAGTGTTACTTGCTGCAACTGGTTCAGGCTCTTCGGTTTGAGCGTTCTGATAAATCTCGCCTTTCTCATTTTCTTGTCCAGCGTGCATTACGCAATATTGAATTGGCAAGCTTTCTTCGCTGGTACGTGGCTGTTGAACTTTATGACCCTGCATATGCCAAACGTTTTTATTGCACTTATGAGATTCTGGAGGAGAATATGATGAAGATGTCGGCTGGTGTAAATGTAGAGGATGATGGTTTTAAACAATGGCAGAGTTTGGTACGTCAGACAGAATTGACTGCTCAGTTATGTTCAATATCAAGAGATGTAAGGAATGTTCGAGGTAATACACAGAAGAAGATTGAAAAGCTTAGACAACTGCTTTCTGGTCTTCTTAGTGAGCTTACTTATTTTGATGAGCCAATACGATCACCTCTGGCTCCAGGTGTCCTTATTACCGGGATTGTACCCTCAGAGTCATCAATATTTAGAAGTGCATTGCATCCTCTGCGCCTTACTTTTAGAACAGCAGATGGTGAAACTCGTAAGATCATATTTAAAAAGGGTGATGATCTTCGGCAGGACCAGTTGGTTGTTCAAATGGTATCACTTATGGATCGATTGCTCAAGTTAGAAAACCTTGATCTGCACTTAACACCATACAAGGTGCTAGCAAGTGGGCAAGATGAAGGCATGTTGGAATTCATTCCATCCCATTCATTGGCGCAGATTCTATCAGAGAATCGGAGCATCATAAGCTATTTGCAGAAATTTCATCCCGATGACCATGGACCTTTCGGAATTACAGCTACCTGTCTTGAAACGTTTATAAAAAGTTGTGCTGGGTATTCTGTTATCACATATATACTTGGTATTGGAGACAGGCACTTAGACAACCTCCTCCTTAGAGATGATGGACGTCTTTTCCATGTTGACTTTGGTTTCATCCTTGGGAGAGATCCTAAGCCATTTCCACCGCCAATGAAACTTTGCAAGGAAATGGTTGAGGCTATGGGTGGAGCTGAGAGCCAATATTATACTAGGTTTAAGTCCTACTGCTGTGAAGCTTACAACATTCTTCGGAAATCTAGTAACCTAATTTTAAATCTATTTTACTTAATGGCGGGGTCTAATATTCCCGACATAGCCTCTGATCCTGAAAAGGGTATTCTTAAGCTTCAAGAAAAGTTTCGGTTGGACTTGGATGATGAAGCAAGTATACATTTCTTCCAGGATCTTATTAATGAGAGTGTGAGTGCATTGTTCCCTCAGATGGTTGAGACCATTCATCGCTGGGCTCAGTATTGGCGATAA 2433 0.4221 MTSNEFRFFLSCDINLPVTFRIDRLEGNLPLPINSENNVSTEGRTAELYVECALYIDGAPFGLPTRTRLVSTGSSYSWNELITLTTKYRDLTAQSQLTFTVWDVSHGEGLIGGATILLFNNKKQLKTGKQKLRLWAGKEADGAFPTSTPGKVPRHERGELERLEKLVNKYERGQIQRVDWLDRLTFKTMERIKERESLKNGNSHLYLVVDFCSFEHQVVFQESGANFLFPSPIASTNDIVIVWDPEMGKINPSEHKQLKLARSLTRGVIDRDLKPSSNERKSIQRILKYPPTRTLNGDERQLLWKFRFSLMSEKRALTKFLRCVEWSDVQEAKQALELMGKWEMIDVCDALELLSPVFESEEVRAYAVSVLERADDEELQCYLLQLVQALRFERSDKSRLSHFLVQRALRNIELASFLRWYVAVELYDPAYAKRFYCTYEILEENMMKMSAGVNVEDDGFKQWQSLVRQTELTAQLCSISRDVRNVRGNTQKKIEKLRQLLSGLLSELTYFDEPIRSPLAPGVLITGIVPSESSIFRSALHPLRLTFRTADGETRKIIFKKGDDLRQDQLVVQMVSLMDRLLKLENLDLHLTPYKVLASGQDEGMLEFIPSHSLAQILSENRSIISYLQKFHPDDHGPFGITATCLETFIKSCAGYSVITYILGIGDRHLDNLLLRDDGRLFHVDFGFILGRDPKPFPPPMKLCKEMVEAMGGAESQYYTRFKSYCCEAYNILRKSSNLILNLFYLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEASIHFFQDLINESVSALFPQMVETIHRWAQYWR 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1054 810 Gene3D - 460 609 - -
Lal23g1054 810 Pfam Phosphoinositide 3-kinase C2 45 186 IPR002420 -
Lal23g1054 810 CDD C2_PI3K_class_III 25 174 - -
Lal23g1054 810 PANTHER PHOSPHATIDYLINOSITOL 3-KINASE CATALYTIC SUBUNIT TYPE 3 21 805 - -
Lal23g1054 810 SMART pi3k_hr2_4 270 455 IPR001263 -
Lal23g1054 810 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 39 153 IPR035892 -
Lal23g1054 810 SUPERFAMILY ARM repeat 254 443 IPR016024 -
Lal23g1054 810 PIRSF PI3K_Vps34 1 399 IPR008290 GO:0016303|GO:0046854|GO:0048015
Lal23g1054 810 PIRSF PI3K_Vps34 395 810 IPR008290 GO:0016303|GO:0046854|GO:0048015
Lal23g1054 810 SUPERFAMILY Protein kinase-like (PK-like) 464 802 IPR011009 -
Lal23g1054 810 Gene3D - 611 810 IPR036940 GO:0016301
Lal23g1054 810 Gene3D C2 domain 13 161 IPR035892 -
Lal23g1054 810 ProSiteProfiles C2 phosphatidylinositol 3-kinase (PI3K)-type domain profile. 25 173 IPR002420 -
Lal23g1054 810 SMART pi3k_hr1_6 556 808 IPR000403 -
Lal23g1054 810 Gene3D - 234 444 IPR042236 -
Lal23g1054 810 SUPERFAMILY MHC antigen-recognition domain 214 256 IPR011162 -
Lal23g1054 810 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 559 573 IPR018936 GO:0016301
Lal23g1054 810 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 529 795 IPR000403 -
Lal23g1054 810 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 652 672 IPR018936 GO:0016301
Lal23g1054 810 ProSiteProfiles C2 domain profile. 10 136 IPR000008 -
Lal23g1054 810 ProSiteProfiles PIK helical domain profile. 270 445 IPR001263 -
Lal23g1054 810 Pfam Phosphatidylinositol 3- and 4-kinase 557 756 IPR000403 -
Lal23g1054 810 CDD PI3Ka_III 270 428 - -
Lal23g1054 810 CDD PI3Kc_III 463 807 - -
Lal23g1054 810 Pfam Phosphoinositide 3-kinase family, accessory domain (PIK domain) 272 448 IPR001263 -
Lal23g1054 810 PANTHER PHOSPHATIDYLINOSITOL KINASE 21 805 IPR015433 GO:0046854|GO:0048015
Lal23g1054 810 SMART pi3k_hr3_6 20 119 IPR002420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1054 Lal-Chr23 12279631 12294335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1054 1 810 Acyl Lipid Metabolism Gene Families AT1G60490 83.313 0.0 1403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1054 K00914 - gmx:547983 1522.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1054 23 12279631 12294335 Lal23g1054 23 12279631 12294335 ECH