Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal23g0779 | ATGGCTGCTTCAACAACACCTAAAATTGACAAAGACCCTTCTTCTTCTTCACAACCACCTTCACGTGCCTTTCTACACACAGTACAAGAATTCACTTCAATCTATAGTTCACTGCCACCTAGACCTTCAATACAAGAGGTTGAAGCTGCCACGTGTATAGTAGACACTGTGAACAACGAGGAACAAACCAAACTCCAAGAACTTTCAATGCAAAAACCACCCCATGATGTTCCTCACAACCTTTTCTCTGTCCTACAACAACTGAAGAAGACATTGGTTATGTTCCAGTGTTATGAACAGAGGAAAGAAGCACTTCATGTTGTTCAGTTGGAAAAGATGTTTCATACCTTTGGTGATCTCATTCAGAAGGCTTCTGAATTGGTTTCTGGGGATACCCAAATAAACAAGTTTTCAACTTTATCTGACCCTTTTGAGAAAATTGAAAGAGATGTTGCTATCATTGATGAAAGTTTGGTGAAGAAGGAAGAACAGAATAAGAATGATTTTGAAACAGAAAGGGGTTCTTCAATGAAGGGATTCTTATCAGCTGGCAATGAAAGCTGTGAGAAATTAAGCCTAATGAAAGTGGCTACTCTAGTTGAAAACTTAGCTAATAGTGGAGCAACAACTCTTGAGCTTAGAGGAAAGTTGGTAGATCAGATGGAGTGGTTGCCTGTGTCAATTGGGAAACTATCCGAAGTCACTGAAATAGACCTATCCGAAAACAGAATCATGGCTCTTCCAACAACCATAGAGGGTCTCAAGGCCTTAACAAAACTCGATCTTCACTCAAACCAGCTTATAAATCTTCCCAACTCATTTGGCGAATTGATAAGCCTTACTCATCTTGACCTCCACGCCAACCGATTGAAATCATTGCCTGCTTCTTTCGGAAACTTGATAAATCTCATTGATCTTGACTTGAGTTCAAATGTGTTCACACATTTGCCCGAGACAATTGGTAATTTAAGCAGCTTGAAGATATTAAATGTTGAGACAAATGTGCTTCAGGAATTGCCTTACACAATCGGAAATTGTTCATCACTATCCGTGCTGAAGTTAGATTTCAATGAGCTCAAGGCATTACCTGAGGCAATCGGGAAGCTTGAATTGTTAGAGATTCTCACTTTGCACTATAATAGAGTTAAGAGTTTGCCTTCAACTGTGGGTAAACTATGCAATCTGAAGGAACTCGATATTAGCTTTAATGAACTTGAGTTCGTACCCGAGAACCTATGTTTTGCCGTAAATTTGAAGAAATTAAACTTGGCAAACAACTTTGCTGATCTAAGAGCCTTGCCAAGATCCATTGGAAATCTTGAAATGCTTGAGGAGTTGGATATAAGTGATGATCAAATAAGAGCCTTACCAGATTCTTTTAGGTTCTTATCAAAGTTGAGAGTTTTTAGAGCTGATGAGACTCCTCTTGAGATGCCACCAAAAGAAGTGATCAAGTTGGGTGCTCAGGAAGTTGTGAAGTATATGGCTGATTTTGCCATTGAGAGTGATGCAAAAATTCTGCCAACAAAGAAGAAGAATAAGAATGGATTTTGGTTCTGGTTTTGTTCCATATTTTGCCCTCAGCAGATACAGTGA | 1596 | 0.3916 | MAASTTPKIDKDPSSSSQPPSRAFLHTVQEFTSIYSSLPPRPSIQEVEAATCIVDTVNNEEQTKLQELSMQKPPHDVPHNLFSVLQQLKKTLVMFQCYEQRKEALHVVQLEKMFHTFGDLIQKASELVSGDTQINKFSTLSDPFEKIERDVAIIDESLVKKEEQNKNDFETERGSSMKGFLSAGNESCEKLSLMKVATLVENLANSGATTLELRGKLVDQMEWLPVSIGKLSEVTEIDLSENRIMALPTTIEGLKALTKLDLHSNQLINLPNSFGELISLTHLDLHANRLKSLPASFGNLINLIDLDLSSNVFTHLPETIGNLSSLKILNVETNVLQELPYTIGNCSSLSVLKLDFNELKALPEAIGKLELLEILTLHYNRVKSLPSTVGKLCNLKELDISFNELEFVPENLCFAVNLKKLNLANNFADLRALPRSIGNLEMLEELDISDDQIRALPDSFRFLSKLRVFRADETPLEMPPKEVIKLGAQEVVKYMADFAIESDAKILPTKKKNKNGFWFWFCSIFCPQQIQ | 531 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal23g0779 | 531 | ProSiteProfiles | Leucine-rich repeat profile. | 279 | 300 | IPR001611 | GO:0005515 | |
| Lal23g0779 | 531 | SUPERFAMILY | L domain-like | 202 | 474 | - | - | |
| Lal23g0779 | 531 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING | 25 | 526 | - | - | |
| Lal23g0779 | 531 | PANTHER | PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 5 | 25 | 526 | - | - | |
| Lal23g0779 | 531 | SMART | LRR_typ_2 | 254 | 276 | IPR003591 | - | |
| Lal23g0779 | 531 | SMART | LRR_typ_2 | 440 | 462 | IPR003591 | - | |
| Lal23g0779 | 531 | SMART | LRR_typ_2 | 369 | 391 | IPR003591 | - | |
| Lal23g0779 | 531 | SMART | LRR_typ_2 | 300 | 322 | IPR003591 | - | |
| Lal23g0779 | 531 | SMART | LRR_typ_2 | 277 | 299 | IPR003591 | - | |
| Lal23g0779 | 531 | SMART | LRR_typ_2 | 231 | 253 | IPR003591 | - | |
| Lal23g0779 | 531 | SMART | LRR_typ_2 | 347 | 368 | IPR003591 | - | |
| Lal23g0779 | 531 | SMART | LRR_typ_2 | 392 | 415 | IPR003591 | - | |
| Lal23g0779 | 531 | SMART | LRR_typ_2 | 323 | 346 | IPR003591 | - | |
| Lal23g0779 | 531 | SMART | LRR_bac_2 | 369 | 388 | - | - | |
| Lal23g0779 | 531 | SMART | LRR_bac_2 | 277 | 296 | - | - | |
| Lal23g0779 | 531 | SMART | LRR_bac_2 | 323 | 342 | - | - | |
| Lal23g0779 | 531 | SMART | LRR_bac_2 | 346 | 365 | - | - | |
| Lal23g0779 | 531 | SMART | LRR_bac_2 | 392 | 411 | - | - | |
| Lal23g0779 | 531 | SMART | LRR_bac_2 | 440 | 459 | - | - | |
| Lal23g0779 | 531 | SMART | LRR_bac_2 | 254 | 273 | - | - | |
| Lal23g0779 | 531 | SMART | LRR_bac_2 | 300 | 319 | - | - | |
| Lal23g0779 | 531 | SMART | LRR_bac_2 | 415 | 436 | - | - | |
| Lal23g0779 | 531 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Lal23g0779 | 531 | Pfam | Leucine rich repeat | 279 | 336 | IPR001611 | GO:0005515 | |
| Lal23g0779 | 531 | Gene3D | Ribonuclease Inhibitor | 181 | 498 | IPR032675 | - | |
| Lal23g0779 | 531 | ProSiteProfiles | Leucine-rich repeat profile. | 256 | 277 | IPR001611 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal23g0779 | Lal-Chr23 | 10315648 | 10318270 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lal23g0779 | 227 | 455 | Receptor kinase-like Gene Family | AT3G11080 | 34.177 | 9.44e-24 | 103 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal23g0779 | - | - | lja:Lj0g3v0066329.1 | 753.051 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal23g0779 | 23 | 10315648 | 10318270 | Lal23g0779 | 23 | 10315648 | 10318270 | ECH |