Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0760 ATGGAGGGTCTGATTAACGATGAAGATGATAACAACAACAGAGAACAACGTGATGAACGACCCAGATCCTCTTGGGCAGAGGTTGTCTCTGGAGAACAAGATCACCAGCAACAGCAGGAGGAGGAGGAGGAGGAGGAAGAACAGTGGCAAGATGGTAGTTATAGGAGGAATTCAAGCACAAGGCCTCATCAGTCAGATGAAAATAACGATGATGGATGGCAGACTGTTGGCAAGAAACATTCAAGGCAGCAACACAAGATTCAAAAGGATGGCTGGAACCAATATAAACTACCTCCTGATGAGCAACAATACTCTAATGAGGTTGAAATCGGTGATCGCGTGGAGCCTACAGAAGATGAACTTACCGATCTGTCACGAGCTTGCGAAAAACTTTGGGATCTCGATTTAAACCGTTTGGTACCTGGCAAGGACTATGAGATTGACTGTGGTAAAGGAAAAAAGGCTTTCCACAAAGGTGATATGGCACAAAGGAGCTTGTTTACTTGGGTTAATGATGATGTATTCAGAAAGCCTACTTTTGGTCGATTTCTTTCGCTTTTAGATAATTACATTCCTCATCAAGGTAGAGAGGAAGTTGTAACATCTGAAGAAATTCAAGAGCAAGCTTCTTTCATTGAAGAAATCAGTAGAACAGCACCAATCAAATATGTTCACAGGTATCTTGCATCCAAAGGAATTGTATCAAGGAGCTACCAAGATTTCAAAAGAATGATGACTAGCCTGTGGTTCGATCTTTATGGTCGCGGCGGAACTTCTGGCTCTTCTTCTGCCTTTGAACATGTTTTTGTTGGAGAAATCAAACAGAACAATGAAGTTTCTGGATTTCATAACTGGCTGCAGTTTTACCTTGAAGAAGCAAAAGGAAGAGTTGATTATCAAGGCTACATTTTTCCCGGTCGACGGGGAGAAATTGTGAGTGACTATCCCTTAACTTCGCCGGATTCGGAAACTCAGATATTGACAATTCAGTTTGAATGGAATGGTGTTCTGAAATCAGTTTCAAGCACATTGGTTGGAGTTAGCCCTGAATTTGAAATTGCTTTGTACACCTTATGTTTCTATGCTGGTGAGGAGAATAACTACATTCAGCTTGGTCCATATGCACTTAATATCAAGTGCTATCATCATGGACATAAAATTGGATCTGTTTTCCCCATTGCAGATTCTTGA 1191 0.4131 MEGLINDEDDNNNREQRDERPRSSWAEVVSGEQDHQQQQEEEEEEEEQWQDGSYRRNSSTRPHQSDENNDDGWQTVGKKHSRQQHKIQKDGWNQYKLPPDEQQYSNEVEIGDRVEPTEDELTDLSRACEKLWDLDLNRLVPGKDYEIDCGKGKKAFHKGDMAQRSLFTWVNDDVFRKPTFGRFLSLLDNYIPHQGREEVVTSEEIQEQASFIEEISRTAPIKYVHRYLASKGIVSRSYQDFKRMMTSLWFDLYGRGGTSGSSSAFEHVFVGEIKQNNEVSGFHNWLQFYLEEAKGRVDYQGYIFPGRRGEIVSDYPLTSPDSETQILTIQFEWNGVLKSVSSTLVGVSPEFEIALYTLCFYAGEENNYIQLGPYALNIKCYHHGHKIGSVFPIADS 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0760 396 MobiDBLite consensus disorder prediction 7 25 - -
Lal23g0760 396 PANTHER - 13 395 - -
Lal23g0760 396 ProSiteProfiles Eukaryotic uridylate-specific endoribonuclease (EndoU) domain profile. 120 396 IPR018998 GO:0004521
Lal23g0760 396 SUPERFAMILY EndoU-like 123 394 IPR037227 -
Lal23g0760 396 PANTHER PLACENTAL PROTEIN 11-RELATED 13 395 IPR039787 GO:0004521
Lal23g0760 396 Pfam Endoribonuclease XendoU 123 392 IPR018998 GO:0004521
Lal23g0760 396 Coils Coil 28 48 - -
Lal23g0760 396 MobiDBLite consensus disorder prediction 60 78 - -
Lal23g0760 396 MobiDBLite consensus disorder prediction 1 113 - -
Lal23g0760 396 CDD XendoU 120 392 IPR018998 GO:0004521
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0760 Lal-Chr23 10172624 10175987 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0760 K14648 - gmx:100813919 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0760 23 10172624 10175987 Lal23g0760 23 10172624 10175987 ECH