Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0635 ATGGCTTCCAAACTCGCGAAAACGGGTTCCTTTCGCCACGGTTTGGCCGAGAAGAAAGAGAGGCTATTATCCATGGCTGGAGACTATTCCATTGACATGCCTGAATTAGACTTGGAGGAAGAACATGCAAGTTATAAGTGGTGTTTGTTTGATGGAATAGTGAAGTGTTGGAAAAGGGTTAAGAGTTTTGGTGTGAAAGCATGGAAAATAGGTCGTTCTGACCCAAGGAATGTTATGTTCTCAGCCAAACTAGGACTTGCTTTAACTCTTATCTCACTTTTGATATTTTTAAGAGAAGATATGAGTCGCTATTCAGTTTGGGCTATTCTTACTGTTGTCGTCGTCTTTGAATTTCATATAGGGGCAACTCTTAGCAAGGGGTTAAACAGAGGATTGGGGACCCTATCAGCTGGAGCACTTGCTTTGGGAATGGCAGAGTTATCAGCTTTGGCTGGAAAATTGGAAGAACCAATCATTATTATTAGCATCTTCATAGTAGGATTTTGTGCAACCTATGCAAAGCTATTTCCAACATTGAAGCCTTATGAGTATGGCTTCCGCGTGTTCTTGATCACCTATTGCTTCATAACAGTATCTGGGTATAGAACTGGGGAATTTGTTAATACAGCTGTGAACAGATTTTTGCTCATTGCACTTGGTGCTGCTGTATCTTTGGGAGTAAATATCTGTATATATCCAATCTGGGCTGGTGAGGATCTGCATAATCTTGTCACCAAAAATTTCATGGGTGTTGCAACATCTTTAGAAGGTAGATTCAGTGTTTTAAATTATGGTTACCATCGCGATTGCAGTAACAGTTATAGTTACTGCAATTGCGGCCGTTGCGATGTGAATTGCGGCTCTTGCGACATTGTCAATAACTACCTTAGTTGTATTGAATATAAGAGAGTGCCATCAAAGATTCTTACTTATGAAGCTTCTGATGATCCAATTTACAATGGCTACAGATCAGCTGTTGAATCTACAAGCAAAGAGGATTCATTGATTGGATTTGCTGTTTGGGAACCACCTCATGGTCATTACAAAATGCTTAAATATCCATGGAAAAATTATGTTAAAGTTAGTGGGGCACTGAGGCATTGTGCATTTATGGTCATGGCTATGCATGGATGCATACTTTCTGAAATACAGGCCCCGGCCGAAAAGAGACATGTTTTCCATTGTGAGCTTAAGAGGGTAGGCTCCGAAGGAGCGAAAGTGTTGCACGAACTCGGGAACAAACTTCGAAAGATGGAGAAACTAGACCGGGAAGATTTGCTGGATGAAGTACATGAGGCTGCTGAAGAATTGCAACATAAGATTGATAAAAAGTCATACCTTCTTGTAAATTCAGAGAGCTGGGAAATTGGAAATAGGCCAAGAGAAGTTGAAGGTGATAATCCCCAAGGCCTTTTCAAAAGGGATGCAGAAAGAAAATTTCTAGAGCATAAATCTCTTAGTGAAGCTGTACTTGATCTTAGATCAATTGAAGTTCCAAAAAGTTGGGATGGAATACTAACATCAGAAAATAACCCTGCTGTTCCTGCAGCTATTACATTTAACAACATGTCAAAAACTTATGAAAGTGCTAGTGCACTATCTCTAACAACATTTACATCACTTTTGATTGAATTTGTAGCAAGGCTTCAGAACCTAGTGGATTCATTTGAAGAATTAGGTGAGAAAGCAAAGTTTGTGGACCCTCTTGAGCAACAAGAAGAATCAGTAATACCTGGTGGGTTTTGGACCAGATTATTTAACTGCTTTCAGTCCAAGGATTCAAATATATGTTGA 1794 0.3969 MASKLAKTGSFRHGLAEKKERLLSMAGDYSIDMPELDLEEEHASYKWCLFDGIVKCWKRVKSFGVKAWKIGRSDPRNVMFSAKLGLALTLISLLIFLREDMSRYSVWAILTVVVVFEFHIGATLSKGLNRGLGTLSAGALALGMAELSALAGKLEEPIIIISIFIVGFCATYAKLFPTLKPYEYGFRVFLITYCFITVSGYRTGEFVNTAVNRFLLIALGAAVSLGVNICIYPIWAGEDLHNLVTKNFMGVATSLEGRFSVLNYGYHRDCSNSYSYCNCGRCDVNCGSCDIVNNYLSCIEYKRVPSKILTYEASDDPIYNGYRSAVESTSKEDSLIGFAVWEPPHGHYKMLKYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQAPAEKRHVFHCELKRVGSEGAKVLHELGNKLRKMEKLDREDLLDEVHEAAEELQHKIDKKSYLLVNSESWEIGNRPREVEGDNPQGLFKRDAERKFLEHKSLSEAVLDLRSIEVPKSWDGILTSENNPAVPAAITFNNMSKTYESASALSLTTFTSLLIEFVARLQNLVDSFEELGEKAKFVDPLEQQEESVIPGGFWTRLFNCFQSKDSNIC 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0635 597 Coils Coil 423 443 - -
Lal23g0635 597 Pfam Aluminium activated malate transporter 68 560 IPR020966 GO:0015743
Lal23g0635 597 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 291 592 - -
Lal23g0635 597 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 1 258 - -
Lal23g0635 597 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 258 - -
Lal23g0635 597 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 291 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0635 Lal-Chr23 9083716 9093842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0635 6 568 Miscellaneous Gene Families AT3G18440 57.237 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0635 - - gmx:100777792 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0635 23 9083716 9093842 Lal8g0420 8 2825294 2829943 ECH
Lal23g0635 23 9083716 9093842 Lal23g0635 23 9083716 9093842 ECH