Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0507 ATGCCTGGTATCGTAAAATCCCCAACCGACGCTCCACCTCCCAGAATCACAATACCCAATACCCCAACTCAAAGAACCGAATCCAACACAACCATAACCAAAACCCCTTCTCCTGTCCCTAAAAAAAACCCTTCTCCCTCCCGGTCCAAGAAGAAAAACCCAGAAACCCCAACCTCGAACCCGGTTCTCTCCGAATCCTCACTCGACAACCCGGATCTCGGTCCATTCCTCCTCAAAGTCGCTAGAGACACAATTGCCTCTGGTGAGGGCCCCACCAAGGCATTAGATTACGCTATCCGAGCCTCGAAGTCTTTCGAGCGTTGCGCAGTCGATGGCGAGCCTAGTTTGGACCTCGCCATGAGCCTCCATGTGCTTGCTGCTATTTACTGCAGTTTAGGGAGGTTTGAGGAGGCCGTGCCCGTGCTTGAGCGCGCGATCCAGGTCCCCGATGTGGATCGCGGTGCAGATCACGCACTTGCGGCTTTCTCAGGGTATATGCAGTTAGGGGATACGTTTTCTATGCTTGGACAGGTGGATAAGTCTATATCATGCTATGATCAAGGGCTTCAGATTCAGATCCAAGCGTTGGGTGAGACTGATCCTAGAGTAGGAGAGACTTGTCGATACTTGGCCGAGGCCAATGTTCAAGCGATGCAGTTTGATAAAGCAGAGGAGCTGAGCAAGAAAACACTGGAGATTCATCGTGCACACAGTGAACCAGCATCTCTTGAGGAGGCAGCTGATAGAAGGCTTATGGCCCTTATATGCGAGGCAAAGGGAGATTATGAATCAGCTCTTGAGCACCTTGTCCTTGCCAGCATGGCTATGATTGCGAATGGACAAGACAATGAAGTTGCTTTTATTGATGTCAGCATTGGAAACATTTACATGTCTCTCTGTCGCTTTGATGAGGCTATCTTCTCATACCAGAAGGCACTAACTGTCTTCAAATCATCCAAGGGTGAAAACCATCCTTCGGTTGCATCTGTCTTTGTACGTCTTGCTGATTTGTATCACAGAACTGGAAAGCTTCGAGAGTCCAAGTCCTATTGTGAAAATGCTCTAAGGATATACTCAAAACCAGTGCCTGGAACCACATCAGAAGAGATTGCTGGTGGTTTAACAGAAGTTTCAGCCATTTTTGAATCTGTAGATGAGCCCGAGGAGGCGCTGAAACTCTTACAAAAGGCAATGAAATTGTTGGAGGATAAACCAGGACAGCAGAGCACAATTGCTGGAATAGAAGCACGAATGGGAGTGATGTATTACATGACTGGGAGGTACGAAGAAGCAAGGAACTCTTTTGAGAGTTCTGTAACAAAACTCAGAGCCAGCGGGGAAAGGAAGTCTGCCTTCTTCGGAGTTGTATTGAACCAGATGGGATTGGCATGTGTACAGCTGTTCAAGATAGATGAAGCTGCTGAATTATTTGAAGAAGCTAGGGGAATTCTTGAACAGGAGTGTGGTCCATGCCATCAAGATACTCTTGGAGTATACAGCAATCTTGCAGCAACTTATGATGCTATGGGAAGGGTGGGGGATGCTATTGAGATCTTAGAATATGTCCTTAAATTGAGGGAGGAAAAGCTGGGAATAGCAAATCCTGATTTTGAAGATGAAAAGCGTCGTCTGGCTGAACTTCTGAAAGAAGCGGGGAAGACCCGCGATAGAAAAGCGAAATCTCTGGAAAACCTTATTGATCCCAACTCAAAGAGGACAAAGAAGGAAGGGGGAAAGAAGTGGCCTGGTTTGGGTTTTAGAATTTAA 1767 0.4709 MPGIVKSPTDAPPPRITIPNTPTQRTESNTTITKTPSPVPKKNPSPSRSKKKNPETPTSNPVLSESSLDNPDLGPFLLKVARDTIASGEGPTKALDYAIRASKSFERCAVDGEPSLDLAMSLHVLAAIYCSLGRFEEAVPVLERAIQVPDVDRGADHALAAFSGYMQLGDTFSMLGQVDKSISCYDQGLQIQIQALGETDPRVGETCRYLAEANVQAMQFDKAEELSKKTLEIHRAHSEPASLEEAADRRLMALICEAKGDYESALEHLVLASMAMIANGQDNEVAFIDVSIGNIYMSLCRFDEAIFSYQKALTVFKSSKGENHPSVASVFVRLADLYHRTGKLRESKSYCENALRIYSKPVPGTTSEEIAGGLTEVSAIFESVDEPEEALKLLQKAMKLLEDKPGQQSTIAGIEARMGVMYYMTGRYEEARNSFESSVTKLRASGERKSAFFGVVLNQMGLACVQLFKIDEAAELFEEARGILEQECGPCHQDTLGVYSNLAATYDAMGRVGDAIEILEYVLKLREEKLGIANPDFEDEKRRLAELLKEAGKTRDRKAKSLENLIDPNSKRTKKEGGKKWPGLGFRI 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0507 588 Pfam MalT-like TPR region 123 271 IPR041617 -
Lal23g0507 588 MobiDBLite consensus disorder prediction 50 67 - -
Lal23g0507 588 Gene3D Tetratricopeptide repeat domain 162 272 IPR011990 GO:0005515
Lal23g0507 588 ProSiteProfiles TPR repeat profile. 286 319 IPR019734 GO:0005515
Lal23g0507 588 MobiDBLite consensus disorder prediction 553 582 - -
Lal23g0507 588 Gene3D Tetratricopeptide repeat domain 69 161 IPR011990 GO:0005515
Lal23g0507 588 Coils Coil 537 557 - -
Lal23g0507 588 Gene3D Tetratricopeptide repeat domain 455 579 IPR011990 GO:0005515
Lal23g0507 588 Gene3D Tetratricopeptide repeat domain 273 454 IPR011990 GO:0005515
Lal23g0507 588 MobiDBLite consensus disorder prediction 1 19 - -
Lal23g0507 588 Pfam Tetratricopeptide repeat 286 359 - -
Lal23g0507 588 Pfam Tetratricopeptide repeat 456 528 - -
Lal23g0507 588 MobiDBLite consensus disorder prediction 1 68 - -
Lal23g0507 588 SMART tpr_5 371 404 IPR019734 GO:0005515
Lal23g0507 588 SMART tpr_5 119 152 IPR019734 GO:0005515
Lal23g0507 588 SMART tpr_5 496 529 IPR019734 GO:0005515
Lal23g0507 588 SMART tpr_5 162 195 IPR019734 GO:0005515
Lal23g0507 588 SMART tpr_5 286 319 IPR019734 GO:0005515
Lal23g0507 588 SMART tpr_5 246 279 IPR019734 GO:0005515
Lal23g0507 588 SMART tpr_5 328 361 IPR019734 GO:0005515
Lal23g0507 588 SMART tpr_5 204 237 IPR019734 GO:0005515
Lal23g0507 588 SMART tpr_5 412 445 IPR019734 GO:0005515
Lal23g0507 588 SMART tpr_5 454 487 IPR019734 GO:0005515
Lal23g0507 588 MobiDBLite consensus disorder prediction 20 38 - -
Lal23g0507 588 MobiDBLite consensus disorder prediction 553 588 - -
Lal23g0507 588 SUPERFAMILY TPR-like 114 267 IPR011990 GO:0005515
Lal23g0507 588 SUPERFAMILY TPR-like 282 431 IPR011990 GO:0005515
Lal23g0507 588 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 2 587 - -
Lal23g0507 588 SUPERFAMILY TPR-like 414 554 IPR011990 GO:0005515
Lal23g0507 588 PANTHER - 2 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0507 Lal-Chr23 7833952 7838329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0507 125 331 Glycosyltransferase AT3G04240 24.686 3.24e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0507 - - gmx:100815100 1005.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0507 23 7833952 7838329 Lal23g0507 23 7833952 7838329 ECH