Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0500 ATGACTACAACAGATATTGCTCGAACAGTAGTTGGCATCATAGGAAATATCATTTCGGGCTTCCTGTTTCTGTCTCCAATGCCAACTTTTGTGGCAATATGCAAAAGAGGATCAGTGGAGCAATACTCCCCAGCACCATATCTAGCAACACTTGTGAACTGCATGGTTTGGACTCTCTATGGTCTACCCATGGTGCACCCACACAGTCTGCTGGTCGTGACCATCAATGGCTCCGGGTGCGTCATTGAGCTCATCTATGTGACTCTCTTCTTGATCTACTCCGACCGCAGAAAAAGGGTGAAGGTCTTTCTGTTGCTCCTATTGGAACTCATTTTCATCATAGCTCTCACAGCTATCACATTAACACTGGCTCACACCACTAAGAAACGCTCTGCAATTGTTGGAACTATATGCATTGTCTTCAACATTATGATGTATGCTTCACCCTTGGCTGTTATGAAATTGGTGATCACGACAAAAAGCGTGGAGTACATGCCATTGTTCATCTCTATCGCCTCCTTTGGGAATGGCGTGGCATGGACGACTTATGCTCTCATCCGTTTCGATCCATTCATCACAGTACCAAATGGGATTGGGACATTGTTTGCAGTGGCACAGCTGATTCTGTATGCAACCTATTACAAGTCGACCAAGCGACAAATAGCTGCTAGGGAAGGCAACATAGAGATGGATCGGACCGAAGTGGTGGTTGGTAATGATGGCCAAGAAACCAAGCCAAGTTATTGA 747 0.4552 MTTTDIARTVVGIIGNIISGFLFLSPMPTFVAICKRGSVEQYSPAPYLATLVNCMVWTLYGLPMVHPHSLLVVTINGSGCVIELIYVTLFLIYSDRRKRVKVFLLLLLELIFIIALTAITLTLAHTTKKRSAIVGTICIVFNIMMYASPLAVMKLVITTKSVEYMPLFISIASFGNGVAWTTYALIRFDPFITVPNGIGTLFAVAQLILYATYYKSTKRQIAAREGNIEMDRTEVVVGNDGQETKPSY 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0500 248 Gene3D - 126 219 - -
Lal23g0500 248 Gene3D - 6 99 - -
Lal23g0500 248 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016021
Lal23g0500 248 Pfam Sugar efflux transporter for intercellular exchange 10 97 IPR004316 GO:0016021
Lal23g0500 248 PANTHER RAG1-ACTIVATING PROTEIN 1 4 240 - -
Lal23g0500 248 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0500 Lal-Chr23 7738954 7743061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0500 5 227 Miscellaneous Gene Families AT4G10850 58.929 1.48e-94 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0500 K15382 - gmx:100802303 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0500 23 7738954 7743061 Lal23g0500 23 7738954 7743061 ECH
Lal15g1460 15 16819049 16821709 Lal23g0500 23 7738954 7743061 LSH