LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal23g0497	ATGGCATCAATGGCTTCTTCCTCTTCAACTTGTTTATCTTCTTCTTCTTCCTTCTTCACTCCACACTATTCCTCCACTCTCCTATCTTCTCCAATTCCCTCATTTCGTTGCACCTTAATACCTCAATTTCCTTTATCTTCATCATCAACCTTTAACCAAAAGAAAACCCATTCCCTGGTTCCTCTCAAAGCTCAAACCCTTGACTTCTCTGGTTCGTTCTTCGGTGGTGGTGGTGGTGGTGGGTTCGGGTCAGAAGATGATATTATTTCTCCCGGAACCGGGTTCACGGCTGTGGAGGAGAAGGAAGAACCGCAATGCCCACCTGGACTGAGACAGTATGAGACTATGGCGGTTTTGAGGCCTGATTTGTCTGAAGATGAGCGACTAGCACTCACCCAGAAGTATGAGGAGCTGCTTGTTGCTGGAGGTGGCATGTATGTGGAGGTTTTTAACAGAGGAGTCATTCCACTAGCATATAGCATTGCAAGGAAAAACAAGGCAGGAGAGACTAACACTTACTTGGATGGAATCTACCTCTTGTTCACCTACTTCACTAAGCCGGAGTCCATAGAGCCTCTTGATGAAACACTGAAAGCCGACGATGATGTTATCCGGTCAACGAGTTTCAAAATCCGGAAAAGGAAATATTAG	651	0.4562	MASMASSSSTCLSSSSSFFTPHYSSTLLSSPIPSFRCTLIPQFPLSSSSTFNQKKTHSLVPLKAQTLDFSGSFFGGGGGGGFGSEDDIISPGTGFTAVEEKEEPQCPPGLRQYETMAVLRPDLSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIARKNKAGETNTYLDGIYLLFTYFTKPESIEPLDETLKADDDVIRSTSFKIRKRKY	216

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal23g0497	216	CDD	bS6_chloro_cyano	110	211	-	-
	Lal23g0497	216	PANTHER	MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6	22	216	IPR000529	GO:0003735\|GO:0005840\|GO:0006412\|GO:0019843
	Lal23g0497	216	SUPERFAMILY	Ribosomal protein S6	110	214	IPR035980	GO:0003735\|GO:0005840\|GO:0006412\|GO:0019843
	Lal23g0497	216	Pfam	Ribosomal protein S6	112	210	IPR000529	GO:0003735\|GO:0005840\|GO:0006412\|GO:0019843
	Lal23g0497	216	Hamap	30S ribosomal protein S6 [rpsF].	110	213	IPR020814	GO:0003735\|GO:0005840\|GO:0006412\|GO:0019843
	Lal23g0497	216	Gene3D	-	109	216	IPR014717	-
	Lal23g0497	216	PANTHER	30S RIBOSOMAL PROTEIN S6 ALPHA, CHLOROPLASTIC	22	216	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal23g0497	Lal-Chr23	7691220	7694618	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal23g0497	K02990		-	zju:107406685	264.233

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal23g0497	23	7691220	7694618	Lal23g0497	23	7691220	7694618	ECH