Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0419 ATGGAGTCTGCTGCAGCTTTATCCCGCATAGGCCTAGCTGGCCTTGCCGTTATGGGCCAAAACCTTGCCCTCAACATCGCCGACAAGGGCTTCCCTATCTCCGTCTACAACCGCACCACCTCCAAGGTCGACGAGACCGTAGATCGTGCCCATCGCGAGGGCACCCTGCCCTTAACTGGCCACTATAACCCCCGCGACTTCGTCCTCTCCCTCACCCGCCCCCGTTCCGTCATCATCCTCGTCAAGGCCGGTTCCCCTGTTGACCAGACCATCACCGCCCTCTCCGAATACCTGGAACCCGGCGACGCCATCATCGACGGCGGCAATGAGTGGTATGAGAACACTGAACGCCGGATCCAGCAGGTTAATGAGAAAGGCATCCTTTATTTGGGGATGGGTGTTTCTGGAGGTGAAGATGGGGCAAGAAATGGTCCTTCTCTTATGCCTGGTGGGTCCTACCAGGCTTACAGTAATGTTCAAGATATTTTGCATAAAATTGCTGCTCAGGTCAATGATGGTCCTTGTGTTACTTACATAGGTGAGGGTGGTGCTGGTAATTTTGTTAAGATGGTTCACAATGGGATTGAGTATGGTGATATGCAACTTATTTCTGAGGCGTATGATGTGTTGAAGCATGTTGGGGGTTTGTCGAATTCGGAACTTGCGGAGATTTTTGATGAGTGGAATAGAGGAGAGCTGGAGAGTTTTCTGGTTGAGATTACTGCGGATATTTTTAAGGTTAAGGATTACGAGAGTGGCGATGGGTATTTGGTTGATAAGATTTTGGATAAGACTGGTATGAAGGGTACTGGAAAATGGACTGTGCAACAGGCGGCTGAGCTGTCGGTTGCAGCTCCGACGATTGCTGCTTCATTGGATTGCAGGTATTTGAGTGGGTTGAAGGAGGAGAGGGAGAATGCTGCGAGTGTGTTGAAGGATGCTGGGTTGAATGAGGAAGTTGGGGCTTTGAGAAACGGGGTTGATAAGAAGAGGTTGATTGATGATGTTAGGCAAGCTTTGTATGCTTCTAAGATTTGTAGCTATGCTCAAGGGATGAACCTTTTGAGGGCTAAGAGTGTTGAGAAAGGGTGGAATTTGAATTTCGGGGAGTTGGCGAGGATTTGGAAAGGTGGGTGTATCATAAGAGCTGTGTTCTTGGATAGGATCAAGAAAGCTTATCAGAGGAACCCCAACTTGGCTAGTTTGATCGTGGACCCGGAATTCGCAAAGGAAATGGTGCAGAGGCAGGGAGCATGGAGAAGGGTTGTGGGGTTGGCTATATCAGCTGGGATCAGCACTCCGGGGATGTGTGCCAGTCTTGCTTACTTTGACACATATAGGAGAGCAAGGCTTCCAGCTAACCTTGTTCAGGCTCAGAGGGACTTGTTTGGAGCTCACACTTATGAAAGGGTTGATCGTCCTGGTGCTTTCCACACCGAGTGGACAAAACTCGCTCGCGCGAGCGGCAATACTGGAGGCTCTCTCAACTGA 1491 0.5003 MESAAALSRIGLAGLAVMGQNLALNIADKGFPISVYNRTTSKVDETVDRAHREGTLPLTGHYNPRDFVLSLTRPRSVIILVKAGSPVDQTITALSEYLEPGDAIIDGGNEWYENTERRIQQVNEKGILYLGMGVSGGEDGARNGPSLMPGGSYQAYSNVQDILHKIAAQVNDGPCVTYIGEGGAGNFVKMVHNGIEYGDMQLISEAYDVLKHVGGLSNSELAEIFDEWNRGELESFLVEITADIFKVKDYESGDGYLVDKILDKTGMKGTGKWTVQQAAELSVAAPTIAASLDCRYLSGLKEERENAASVLKDAGLNEEVGALRNGVDKKRLIDDVRQALYASKICSYAQGMNLLRAKSVEKGWNLNFGELARIWKGGCIIRAVFLDRIKKAYQRNPNLASLIVDPEFAKEMVQRQGAWRRVVGLAISAGISTPGMCASLAYFDTYRRARLPANLVQAQRDLFGAHTYERVDRPGAFHTEWTKLARASGNTGGSLN 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0419 496 Pfam 6-phosphogluconate dehydrogenase, C-terminal domain 185 481 IPR006114 GO:0004616|GO:0006098
Lal23g0419 496 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 9 180 IPR006115 GO:0050661
Lal23g0419 496 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE 1 490 IPR006183 GO:0004616
Lal23g0419 496 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 183 483 IPR008927 -
Lal23g0419 496 Gene3D - 450 483 - -
Lal23g0419 496 Gene3D - 187 449 IPR013328 GO:0016491
Lal23g0419 496 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING 3, CHLOROPLASTIC 1 490 - -
Lal23g0419 496 TIGRFAM gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 10 482 IPR006113 GO:0004616|GO:0006098
Lal23g0419 496 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 182 IPR036291 -
Lal23g0419 496 PRINTS 6-phosphogluconate dehydrogenase signature 8 31 IPR006183 GO:0004616
Lal23g0419 496 PRINTS 6-phosphogluconate dehydrogenase signature 73 102 IPR006183 GO:0004616
Lal23g0419 496 PRINTS 6-phosphogluconate dehydrogenase signature 126 151 IPR006183 GO:0004616
Lal23g0419 496 PRINTS 6-phosphogluconate dehydrogenase signature 174 202 IPR006183 GO:0004616
Lal23g0419 496 PRINTS 6-phosphogluconate dehydrogenase signature 257 284 IPR006183 GO:0004616
Lal23g0419 496 PRINTS 6-phosphogluconate dehydrogenase signature 371 393 IPR006183 GO:0004616
Lal23g0419 496 PIRSF 6PGD 2 489 IPR006113 GO:0004616|GO:0006098
Lal23g0419 496 SMART 6PGD_2 185 482 IPR006114 GO:0004616|GO:0006098
Lal23g0419 496 Gene3D - 6 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0419 Lal-Chr23 6803476 6804966 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0419 K00033 - zju:107406734 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0419 23 6803476 6804966 Lal23g0419 23 6803476 6804966 ECH