Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1386 ATGGAAAGGGTAAATGGATCTGTTGGAGAATTGAAGCTGTGGTTTTATGATTTCGGAGAATATGTTCCCATCCCCTTTAGTGGAACTAAATTGGTTTTCAAGATGAACTATTATGATCTTCAGAAGAATGCCTACGGAGCCTGTGAAGGAATGAGAGGCTCTCTTCCCATTACTAATCAGAATGGTCCTGTCATTTGCCCTAAGCCATGCAGAGTTGGAGTTTTAACAAACGTGTCTTTACGACCCTTAAGATGGCATTTAAGTCAACAAGTTGAAGAGACTGATTCAAAAGCTGGGGCCGAGCTACTAGACATTCTTCTCAAGAAGGAGAGTTATGAGGAAGAATATGCAAATCAGTTGGTTTCATCTCCCCCATATTTTTTCGGGTCTCCTCCAGTTCGGGCTAGTAATCCCTTGATCAACGATGCTCGATTTAGAGATGAAGAGCACACTCCTATGTCAGGTATTTTTTCGCCATTATCTCCAAATTCAGCATCTCATAAATCAGGATGTGCTAGAACAAAGTATGGACCGAAACCGGCTGCAGTTAGAGTAGAAGGATTTGATTGCCTCAGTAGGGATGGCAAGAATTCCAGCATCCCCTCTGTTGCTTAA 615 0.4228 MERVNGSVGELKLWFYDFGEYVPIPFSGTKLVFKMNYYDLQKNAYGACEGMRGSLPITNQNGPVICPKPCRVGVLTNVSLRPLRWHLSQQVEETDSKAGAELLDILLKKESYEEEYANQLVSSPPYFFGSPPVRASNPLINDARFRDEEHTPMSGIFSPLSPNSASHKSGCARTKYGPKPAAVRVEGFDCLSRDGKNSSIPSVA 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1386 204 PANTHER EXPRESSED PROTEIN 35 204 - -
Lal22g1386 204 PANTHER BNAC02G06400D PROTEIN 35 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1386 Lal-Chr22 16728727 16732926 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g1386 - - aprc:113863703 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g1386 22 16728727 16732926 Lal16g1015 16 6744360 6750661 ECH
Lal22g1386 22 16728727 16732926 Lal8g0427 8 2869275 2871433 ECH
Lal22g1386 22 16728727 16732926 Lal10g0982 10 17084741 17086520 ECH
Lal22g1386 22 16728727 16732926 Lal25g0453 25 3110385 3112729 ECH
Lal22g1386 22 16728727 16732926 Lal22g1386 22 16728727 16732926 ECH
Lal22g1386 22 16728727 16732926 Lal18g0638 18 5547212 5550224 ECH
Lal18g0638 18 5547212 5550224 Lal22g1386 22 16728727 16732926 LSH
Lal12g1374 12 16826483 16828816 Lal22g1386 22 16728727 16732926 PCT
Lal13g1704 13 16682265 16684550 Lal22g1386 22 16728727 16732926 PCT
Lal24g1289 24 14196193 14198336 Lal22g1386 22 16728727 16732926 PCT