Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1288 ATGGGGGCGGTGACGTCATCAATGGCGGCGAAGTTCGCCTTCTTCCCGCCGAATCCACCGTCGTACACGGTGGCGGTGGACGAGGTAACGGGGAAGGCGAAGATGACAGGTGTGGAGATGAGAGAAAACGTGGATGTATTGAAGCTGTGCACGAAGAGAGGGAACAACATCGTTGCAATTTACATCAAGAATCCGTCGGCGACGGCGACCGTGCTTTATTCACACGGTAACGCCGCCGATCTGGGTCAGATGTACGAGTTGTTCACCGAACTCAGTGTTCATCTCAGAGTTAATCTATTAGGTTATGATTATTCTGGGTATGGCCAGTCTTCTGGGAAGCCTAGTGAGCAGAACACTTATGCAGATATAGAAGCTGCTTATAAATGCCTGGTCGAGAAGTATGGGGCGAAAGAGGAAGATATAATTCTGTATGGCCAATCTGTTGGTAGTGGACCTACTACAGATTTGGCGACTCGGTTACCAAACCTTAGGGCTGCGGTTCTCCACAGTCCTATCTTATCGGGCCTTCGAGTCATGTATCCTGTGAAGCGGACATACTGGTTTGACATTTATAAGAACATTGACAAGATTCCTTTGGTCAATTGCCCAGTTCTGATAATTCATGGAACAGCTGATGATGTAGTGGATTGCTCCCACGGGAAGCAACTTTGGGAACTTTGTAAACAAAAGTATGAACCTTTATGGGTCAAAGGAGGAAATCATTGTGACCTGGAGCTTTACCCCCGGTATATAAAACACCTTAAGAAATTTATCGTGGCTATTGAGAAGTCGCATCTAAAAACTCGATCTGGACCTATTCCTGATCAACTGGACAAACCTCGGAACAGCACAGATTTTAGAGAGAAACCTAAAACCAGTATGGATCTGAGGGACAATTCAAGACAGAGTCTTGACTTCAAAGAAAACCCTAGGGCAAGCATAGACCAGAAAGGAAAGTCGGGAGCTGGCACGGATAAGAAAGATAAATCAAGAAAGAGTGTAGATCACCCAGAGAAGGCATATAATGGAGCAGAGGTTCCAGATAAAGCTAGAAATAGCATTGACCGGTTAGTTATAAACTCGCCCTATGTCCTTTGGCGAGATAGTGAGATCAGTTGGTTTGTGCAAAATCAATTGTTTCAGACTCACAGCCACTCACTCCTGAAGATGACAGAGCTTATACATTGA 1188 0.4554 MGAVTSSMAAKFAFFPPNPPSYTVAVDEVTGKAKMTGVEMRENVDVLKLCTKRGNNIVAIYIKNPSATATVLYSHGNAADLGQMYELFTELSVHLRVNLLGYDYSGYGQSSGKPSEQNTYADIEAAYKCLVEKYGAKEEDIILYGQSVGSGPTTDLATRLPNLRAAVLHSPILSGLRVMYPVKRTYWFDIYKNIDKIPLVNCPVLIIHGTADDVVDCSHGKQLWELCKQKYEPLWVKGGNHCDLELYPRYIKHLKKFIVAIEKSHLKTRSGPIPDQLDKPRNSTDFREKPKTSMDLRDNSRQSLDFKENPRASIDQKGKSGAGTDKKDKSRKSVDHPEKAYNGAEVPDKARNSIDRLVINSPYVLWRDSEISWFVQNQLFQTHSHSLLKMTELIH 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1288 395 Gene3D alpha/beta hydrolase 40 253 IPR029058 -
Lal22g1288 395 Pfam Serine aminopeptidase, S33 67 174 IPR022742 -
Lal22g1288 395 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 323 - -
Lal22g1288 395 PANTHER ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN 1 323 - -
Lal22g1288 395 SUPERFAMILY alpha/beta-Hydrolases 4 258 IPR029058 -
Lal22g1288 395 MobiDBLite consensus disorder prediction 269 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1288 Lal-Chr22 15622316 15628487 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g1288 K01076 - gmx:100780341 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g1288 22 15622316 15628487 Lal22g1288 22 15622316 15628487 ECH
Lal22g1288 22 15622316 15628487 Lal6g0754 6 5020974 5024420 LSH
Lal24g1324 24 14564819 14568581 Lal22g1288 22 15622316 15628487 PCT
Lal22g1288 22 15622316 15628487 Lal13g1689 13 16579661 16583671 PCT
Lal22g1288 22 15622316 15628487 Lal24g1324 24 14564819 14568581 PCT