Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0934 ATGGCTACTCTTCAGTCTTGGAGAAAAGCCTATGGCGCTCTCAAAGACACTACCAAAGTTGGTCTTGCTCATGTCAACAGCGATTATGCAGATTTGGATGTTGCTATAGTCAAAGCTACGAATCACGTTGAGTGTCCTCCAAAAGATAGACACCTTAGAAAAATTCATTTTGCCACATCTGCTATACGGCCAAGAGCTGATGTTGTTTATTGCATTCATTCCCTTGCTCGTCGATTGGCCAAGACGCGGAATTGGACGGTGGCACTGAAAGCACTAATAGTCATCCATAGGTTGCTGAGGGAGGGTGATCCTACTTTTAGAGAAGAGCTTCTTAATTTTTCTCAGAGGGGACGCATTCTCCAGCTTTCTAATTTCAAGGATGATTCTAGTCCAATTGCTTGGGATTGTTCTGCCTGGGTACGTACTTATGCATCATTTTTGGAAGAAAGACTTGAATGTTTCCGGATTCTGAAATATGACATAGAAGCTGAGCGTCTACCCAAGCCTGCCCCAGGGCAGGAAAAGGGGTACAGCAGGACCAGGGATTTGGATACTGAGGAGCTATTGGAGCAGTTGCCTGCTTTGCAACAGCTGCTTTATCGTCTTGTTGGTTGTCGGCCAGAAGGGGCAGCTTTTAGAAACCGTGTGATACAATATGCCCTAGCTCTGGTACTAAAAGAAAGCTTTAAGATCTATTGCACTATTAATGATGGCATTATCAATCTTGTTGATAAGTTTTTTGAGATGACAAGACATGAGGCTATTACAGCCCTTGATGTCTATAAACGTGCGGGTCAGCAGGCAGCAAGTCTCTCTGATTTCTATGAAAGCTGCAAAGGGTTGGAACTTGCTAGGAATTTTCAGTTTCCTGTCTTAAGAGAGCCTCCACAATCTTTTCTTACAACTATGGAGGACTACATAAGGGAGGCACCAAGAGTTGTTATGGTTCCAACTGAGCCCTTGCTGCAGTTGACTTATAGACCAGAAGATGATGTTCTCACAATTGAAGACACAAAATCATCTGTTGAAGAACAGGAGCCATCGGTGCCTGTTGATGATGTTGTTGTCTCTAACTCTGAGCCTGCTCCTCCTTCTCCTCCTCCGCCTCCTCACAACAATTTTGAAACTGGAGACTTATTGGGGTTGAATGACAATACTCCTGATGCTTCATCTATAGAAGAAAGAAATGCTCTCGCCTTAGCTATTATCCCCTCTGAAACTGGAACAACATCAATTGCTTCTCAAGCAACAGATTTTGATCCATCCGGATGGGAGCTTGCTCTGGTTACCTCTACAAGTGCCAATATTTCTTCAGTCAATGAGAGACAATTGGCTGGTGGATTAGATTCTCTCACCCTTAACAGCTTATATGATGAAGGAGCATATAGATCTGCACAGCAACCAGTATATGGAGCACCAGCCCCAAATCCATTTGGTGTGCAAGATCTTTTTGCTTTGTCAAACAACACCCAAATGGCAGCGATGCCTCAACATCAGGTAAACCCGTTCGGTTCGTACCAACCTTATCAGCTACAACAGCCACATATGATGATGAACCCAGAAAATCCTTTTGGGGATACAGGATTTGGGGCATTTCCTGTGAATTCACATTCTCACCCACAGCATAACACTCCATTTGGAAGCACTGGTTTGTTATAA 1659 0.4382 MATLQSWRKAYGALKDTTKVGLAHVNSDYADLDVAIVKATNHVECPPKDRHLRKIHFATSAIRPRADVVYCIHSLARRLAKTRNWTVALKALIVIHRLLREGDPTFREELLNFSQRGRILQLSNFKDDSSPIAWDCSAWVRTYASFLEERLECFRILKYDIEAERLPKPAPGQEKGYSRTRDLDTEELLEQLPALQQLLYRLVGCRPEGAAFRNRVIQYALALVLKESFKIYCTINDGIINLVDKFFEMTRHEAITALDVYKRAGQQAASLSDFYESCKGLELARNFQFPVLREPPQSFLTTMEDYIREAPRVVMVPTEPLLQLTYRPEDDVLTIEDTKSSVEEQEPSVPVDDVVVSNSEPAPPSPPPPPHNNFETGDLLGLNDNTPDASSIEERNALALAIIPSETGTTSIASQATDFDPSGWELALVTSTSANISSVNERQLAGGLDSLTLNSLYDEGAYRSAQQPVYGAPAPNPFGVQDLFALSNNTQMAAMPQHQVNPFGSYQPYQLQQPHMMMNPENPFGDTGFGAFPVNSHSHPQHNTPFGSTGLL 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0934 552 MobiDBLite consensus disorder prediction 338 389 - -
Lal22g0934 552 Gene3D ANTH domain 173 321 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lal22g0934 552 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Lal22g0934 552 SUPERFAMILY GAT-like domain 178 309 - -
Lal22g0934 552 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 535 IPR045192 GO:0048268|GO:0072583
Lal22g0934 552 Gene3D - 7 161 IPR008942 -
Lal22g0934 552 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Lal22g0934 552 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Lal22g0934 552 CDD ANTH_N 32 154 - -
Lal22g0934 552 PANTHER OS05G0549000 PROTEIN 1 535 - -
Lal22g0934 552 SMART enth_2 30 161 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0934 Lal-Chr22 7418061 7428026 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0934 - - gmx:100776929 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0934 22 7418061 7428026 Lal22g0934 22 7418061 7428026 ECH
Lal22g0934 22 7418061 7428026 Lal6g1056 6 7663312 7670025 LSH