Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0837 ATGGTTGATTCATCAAACTTTGATGAAAACTCTGATGTGGGGTATCAGCCTTCACATTCTTCTGTGGATCAAAATGATCATTCACTCACTGAAACTGCTAGCTACTCTCCAATCAGTGGCGATTCCTTACCATATTGCCGGTCTAACTCTGAGGTCTCAAACTTCTCAGAGCATATAGAGGACAATGGCTATGCTAGTGGTGAATCTTCACCTTTTCGGTGGAACACTGCGAAACATGGTGGTAGTCAAGCTTCTCTTTCGAGGTTAGGAATGAAGCAGCGTAGAGATTCATCGGATGGTAAACCCGATGTCCTTGATCTCTTGGACTTAGAACTTGAAATGATGAAGGAAAGATTTTCGAAGATACTACTCGGGGAAGACATGTCTGGTGGTGGAAAAGGTGTATGTACTGCAGTTACAATCTCAAATTCAATCACCAACCTCTATGCCACTGTATTTGGACAAAATCTGAAGTTGGAGCCATTGAAGCCTGAAAAGAAGGCTATGTGGAAAAGAGAAATGAATTGTCTTCTATCTGTGTGTGATTACATTGTAGAATTTGCCCCAACTGCACAATATTTAGATGATGGTACAATTGTTGAGATGATGACAAGTAGAGCAAGATCAGATATTTATATCAATCTCCCAGCTATACAGAAGCTAGAGGCTATGCTCCTAGAAATATTGGAGAGTTTCGACGATACTGAATTTTGGTATGCGGAACAAGGGAGCATATCGGGGAATTCAACTCGTTCGCGTGGAGGCTCGTTTCGTAAGGTTGTTCAAAGGAAAGATGAGAAATGGTGGTTGCCAGTACCTTGTGTTCACCCTGGTGGCATATCAAATGATTCAAGGAAGCACTTGATTGAGAAAAGGGACTGTGCTAATCAAATTCACAAAGCATCCATGGCGATTAATAGCAGTATTCTTGCGGAGATGGATATCCCGGAAACATATATGGCAAATCTTCCCAAGAGTGGAAGAGCATGTCTAGGGGACACAATTTACCGTTGCATGTGTGCTACCGAGAAGTTCTCCCCGGACAACCTTCTTGAAAGTCTCAAAATAAGTTCCGAACATGAAGCGCTTGAGCTGGCAGACAGGGTGGAATCCTCGATGTACACATGGAGACGTAAAGCTTGTTCGAGCCATTCTAAATCATCATGGAACAAAGTAAAAGACATCATGGCCGACACCGACCGGAATGACAAAAACTATGTCTTAGCTGAGAAGGCTGAGACCTTTTTGGTTTGCTTGAAGCAAAGATATCCTGAACTTTCACAGACTTCATTGGATACATGCAAGATTCAATACAACCGGGATGTAGGGAAAGCAATCCTAGAGAGCTACTCAAGGGTATTAGAAAGCTTAGCATTCAACATTGTTTCTTGGATTGAAGATGTTCTTTATGCAGATAAATCAATGAGGAACCAAGTTGTATAG 1443 0.42 MVDSSNFDENSDVGYQPSHSSVDQNDHSLTETASYSPISGDSLPYCRSNSEVSNFSEHIEDNGYASGESSPFRWNTAKHGGSQASLSRLGMKQRRDSSDGKPDVLDLLDLELEMMKERFSKILLGEDMSGGGKGVCTAVTISNSITNLYATVFGQNLKLEPLKPEKKAMWKREMNCLLSVCDYIVEFAPTAQYLDDGTIVEMMTSRARSDIYINLPAIQKLEAMLLEILESFDDTEFWYAEQGSISGNSTRSRGGSFRKVVQRKDEKWWLPVPCVHPGGISNDSRKHLIEKRDCANQIHKASMAINSSILAEMDIPETYMANLPKSGRACLGDTIYRCMCATEKFSPDNLLESLKISSEHEALELADRVESSMYTWRRKACSSHSKSSWNKVKDIMADTDRNDKNYVLAEKAETFLVCLKQRYPELSQTSLDTCKIQYNRDVGKAILESYSRVLESLAFNIVSWIEDVLYADKSMRNQVV 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0837 480 Gene3D PRONE domain, subdomain 1 108 353 - -
Lal22g0837 480 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 325 478 IPR038937 GO:0005085
Lal22g0837 480 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 325 IPR038937 GO:0005085
Lal22g0837 480 MobiDBLite consensus disorder prediction 1 42 - -
Lal22g0837 480 MobiDBLite consensus disorder prediction 62 100 - -
Lal22g0837 480 Gene3D PRONE domain, subdomain 1 358 480 - -
Lal22g0837 480 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 111 476 IPR005512 GO:0005085
Lal22g0837 480 MobiDBLite consensus disorder prediction 68 91 - -
Lal22g0837 480 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 325 478 - -
Lal22g0837 480 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 1 325 - -
Lal22g0837 480 ProSiteProfiles PRONE domain profile. 102 480 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0837 Lal-Chr22 6274029 6277569 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0837 - - gmx:100785956 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0837 22 6274029 6277569 Lal22g0837 22 6274029 6277569 ECH
Lal6g0958 6 6670530 6675257 Lal22g0837 22 6274029 6277569 LSH
Lal6g0958 6 6670530 6675257 Lal22g0837 22 6274029 6277569 PCT
Lal22g0837 22 6274029 6277569 Lal6g0958 6 6670530 6675257 PCT