Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0828 TTTTTTTATTTTATCCAGAGGTGGTGGGTTGGGAAGAAAAGAAACTACAATATTTTCTGCATATCTAAGAGACTTAGACGAATCCCTAATTCTGCACGCTTTTTGCTTGGAATCATAATGGCTAAATTTTTGGTGGACAATGTAGAAACAAATAAGTTTCTTTGGAATTGGTTGTTTGAGATCTGTGAAGAGCCTTGTGTCTTCCCTATGGACTTGCCAGCTTTTCTCCTTTCTAAATTAGAGGTTTCGGCTCTCAAAAAATGCCAAAATTCTGTTGCAGTGCTTGTTTTGTTGTTCTTTGGTCCTCTGCACTCAATGCTGATTCCATTGGAGCATGTTGATGATGCAAAGGAATCATCAAATAATGACAATGATGTAGAAGCCACTATTTCTCCACTCATTAGTGGCCTTCCAGATGATATTTCTCTTTTCTGCCTGGCTAGAGTTCCTAGAAAATATCATTTAGTCCTGAAACGTGTCTCAAAAAGATGGAGGGATTTAGTTTGCAGTGAAGAATGGTATCATTATCGTCGAAAGCATAAACTTGATGAGACCTGGATATATGCTTTATGCAGGGACAAGTTAGATCAGATTTCCTGTTATGTTTTGGATCCGAACTCATCTAGCAGATGTTGGAAGCTCATGCAAGGGCTTCCACCTCGCATCTTGAGAAGAAAAGGTATGGGTTTTGAAGCTTTGGGAAATACGCTATTCTTATTGGGTGGCTGTGGCTGGTCTGAAGATGCTACCAATGAGGTCTATTCATTCAATGCTTCCATGGATTCCTGGGTTGAAGCTGCTTCCTTGTCAACTGCTAGGTGTTACTTTGCTTGTGAAGTTTTGGACGAAAAACTGTACGCCATTGGTGGAATAGGTTCAAATTCAAGTGATCCTCATTCTTGGGATACATTTGACCTTTCTACAAATAGTTGGACATCTCAAACAGATCCTAATATTGTTCCTGAAATTGAAGATTCAGTAGTTCTGGATGGCAAGATATACATCCGATGTGGCAAATCTCCTGTAACTCCCCATGTCTATGCTGTTGTATATGAACCATCAAGTGGCACATGGCAGCACGCAGACGCCGACATGGTTTCAGGATGGAGAGGTCCTGCAGTTGTTGTTGACGGGATCCTTTACGTCTTGGATCAGAGTTCAGGAAGTCGGTTAACGATGTGGCATAAGGAGAGACGTGAATGGATGCCGGTTGGAAAGTTGTCACCATTGCTTACAAGACCACCCTGCCAGCTTGTTGCAATTGGTAAAAGCATTTTCGTTGTTGGCAAAGGGCTTGGCACTGTGGTTGTTGATGTTGGTGATTTGGGAAATGTCGGACGGGTGATGATGAGTTCTTCTATACCCAAAATGATCTCTGATGACAATGTAATTAGCTGTAAATGCTTGACAATATGA 1416 0.4131 FFYFIQRWWVGKKRNYNIFCISKRLRRIPNSARFLLGIIMAKFLVDNVETNKFLWNWLFEICEEPCVFPMDLPAFLLSKLEVSALKKCQNSVAVLVLLFFGPLHSMLIPLEHVDDAKESSNNDNDVEATISPLISGLPDDISLFCLARVPRKYHLVLKRVSKRWRDLVCSEEWYHYRRKHKLDETWIYALCRDKLDQISCYVLDPNSSSRCWKLMQGLPPRILRRKGMGFEALGNTLFLLGGCGWSEDATNEVYSFNASMDSWVEAASLSTARCYFACEVLDEKLYAIGGIGSNSSDPHSWDTFDLSTNSWTSQTDPNIVPEIEDSVVLDGKIYIRCGKSPVTPHVYAVVYEPSSGTWQHADADMVSGWRGPAVVVDGILYVLDQSSGSRLTMWHKERREWMPVGKLSPLLTRPPCQLVAIGKSIFVVGKGLGTVVVDVGDLGNVGRVMMSSSIPKMISDDNVISCKCLTI 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0828 471 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 121 455 - -
Lal22g0828 471 Pfam Kelch motif 272 316 IPR006652 GO:0005515
Lal22g0828 471 Pfam Kelch motif 224 270 IPR006652 GO:0005515
Lal22g0828 471 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 121 455 - -
Lal22g0828 471 SMART kelc_smart 284 331 IPR006652 GO:0005515
Lal22g0828 471 SMART kelc_smart 236 283 IPR006652 GO:0005515
Lal22g0828 471 SUPERFAMILY Kelch motif 197 435 IPR015915 GO:0005515
Lal22g0828 471 Gene3D - 178 446 IPR015915 GO:0005515
Lal22g0828 471 SUPERFAMILY F-box domain 133 200 IPR036047 GO:0005515
Lal22g0828 471 SMART fbox_2 137 177 IPR001810 GO:0005515
Lal22g0828 471 Pfam F-box domain 134 171 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0828 Lal-Chr22 6192321 6196612 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0828 137 412 Miscellaneous Gene Families AT4G33900 25.503 1.99e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0828 - - qsu:112035561 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0828 22 6192321 6196612 Lal22g0828 22 6192321 6196612 ECH