Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0805 ATGAAGTTAACACTTGAGTTCGGAGGGGGATTGGAGCTTCTTTGTGACTCTAAGAAGATTCATAATGTCAACGTCGAACAACAAAACGGAGAAGACAAGTTAACTATGAAAGATTTGCTTTCTTGGGTGCGGACCAACTTGATTAAAGAGAGGCCTGAAATGTTCATGAAAGGAGATACTGTGAGGCCTGGAGTTCTTGTCCTTGTGAATGACTGTGACTGGGAGCTAAGTGGTCAGTTGAGTACATCACTAGAAGAGAAAGATGTTGTAGTTTTTATATCAACCTTGCATGGTGGATAA 300 0.41 MKLTLEFGGGLELLCDSKKIHNVNVEQQNGEDKLTMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLSTSLEEKDVVVFISTLHGG 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0805 99 Pfam Urm1 (Ubiquitin related modifier) 2 99 IPR015221 GO:0005737|GO:0034227
Lal22g0805 99 Hamap Ubiquitin-related modifier 1 [URM1]. 1 99 IPR015221 GO:0005737|GO:0034227
Lal22g0805 99 PANTHER RURM1 PROTEIN 1 99 IPR015221 GO:0005737|GO:0034227
Lal22g0805 99 CDD Ubl_Urm1 3 99 IPR015221 GO:0005737|GO:0034227
Lal22g0805 99 Gene3D - 1 99 IPR012675 -
Lal22g0805 99 SUPERFAMILY MoaD/ThiS 1 99 IPR016155 -
Lal22g0805 99 PIRSF Urm1 1 99 IPR015221 GO:0005737|GO:0034227
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0805 Lal-Chr22 5961249 5965331 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0805 K12161 - gmx:100306072 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0805 22 5961249 5965331 Lal22g0805 22 5961249 5965331 ECH
Lal6g0908 6 6291126 6292948 Lal22g0805 22 5961249 5965331 LSH