Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0799 ATGGCAATGCCTCACCCACCAGTGTTTCTTGCACCACAAAATCCCATGGAAAATGATAAGGATACACAAAAATTAACCTTTGATGCATCTTTCATGCAATACCAACCAAACATTCCATCCCAGTTCATATGGCCTGACCATGAGAAACCATGCCTAACATCACCAGAACTTGAAGTTCCAGAAATTGACTTGAAGGTCTTTCTTTCTGGAGAACCAGAAGACATTTCAAGTGCATGTTCACAAGTGAATGAGGCATGCAAGAAACATGGCTTCTTTCATATTGTTAACCATGGAGTTGATAGTAATCTCAAATCTCAAGCTCTTAACCTCTTACATGATTTCTTCAGCATGCAACTCTCTAAGAAGCAGAAGGCTCAAAGAAAGGTTGGAGAACTTTGTGGGTATTCTAATAGCTTCATAGGAAGGTTCTCATCCAAACTTCCATGGAAGGAAACACTTTCTCTTCGCTACTGTGCGGATCAATCCAGCAAAACTGTGGAGGAATATTTTGTCAATGTTATGGGGGAGGATTTTAAGCAACTTGGGATTGTGTACCAAAACTACTGTGAAGCCATGAGCAATCTATCTCTTGCTATCATGGAACTTCTTGGAATGAGTTTAGGAGTTGGCAGAAAATATTTCAGAGATTTCTTTGAAGGAAATGAATCAGTATTGAGACTAAATTACTACCCACCATGCCAAAAACCTGATTTGGCCTTAGGAACTGGGCCACATTGTGACCCTACATCCCTAACCATACTTCACCAAGATCAAGTTGGGGGTCTACAAGTGTTTGTGGATGGAACATGGTACTCTATTACACCCAAAGAAGATGCCTTTGTTATCAACATTGGTGATACATTTATGGCTCTATCAAATGGGGCTTACAAGAGTTGTTTGCATAGAGCAATTGTGAATAACAAAATAGTGAGAAAATCAATTGCTTTCTTTCTGTGTCCAAGTGGAGATAAAGTGGTGGCTCCTCCAAAAGACCTTGTTAACAATGAGAATCCAAGACTCTATCCAGATTTCAATTGGCCAAGTCTTCTTGAATTTACACAGATGCATTATAGGGCTGACCCAAAAACCCTTGATGCTTTCTCAAGGTGGGTACAAGAAAAAGATGACATGCCCAACAAGAACATAAACTGA 1152 0.3984 MAMPHPPVFLAPQNPMENDKDTQKLTFDASFMQYQPNIPSQFIWPDHEKPCLTSPELEVPEIDLKVFLSGEPEDISSACSQVNEACKKHGFFHIVNHGVDSNLKSQALNLLHDFFSMQLSKKQKAQRKVGELCGYSNSFIGRFSSKLPWKETLSLRYCADQSSKTVEEYFVNVMGEDFKQLGIVYQNYCEAMSNLSLAIMELLGMSLGVGRKYFRDFFEGNESVLRLNYYPPCQKPDLALGTGPHCDPTSLTILHQDQVGGLQVFVDGTWYSITPKEDAFVINIGDTFMALSNGAYKSCLHRAIVNNKIVRKSIAFFLCPSGDKVVAPPKDLVNNENPRLYPDFNWPSLLEFTQMHYRADPKTLDAFSRWVQEKDDMPNKNIN 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0799 383 Pfam non-haem dioxygenase in morphine synthesis N-terminal 59 163 IPR026992 -
Lal22g0799 383 SUPERFAMILY Clavaminate synthase-like 32 359 - -
Lal22g0799 383 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 220 320 IPR005123 -
Lal22g0799 383 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 19 372 - -
Lal22g0799 383 PANTHER GIBBERELLIN 20-OXIDASE 19 372 - -
Lal22g0799 383 Gene3D - 30 357 IPR027443 -
Lal22g0799 383 Pfam 2OG-Fe(II) oxygenase superfamily 222 320 IPR044861 -
Lal22g0799 383 PRINTS Isopenicillin N synthase signature 82 99 - -
Lal22g0799 383 PRINTS Isopenicillin N synthase signature 245 266 - -
Lal22g0799 383 PRINTS Isopenicillin N synthase signature 280 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0799 Lal-Chr22 5874744 5877322 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0799 13 368 Glycosyltransferase AT5G59530 27.671 6.96e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0799 K05282 - gmx:100775693 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0799 22 5874744 5877322 Lal22g0799 22 5874744 5877322 ECH