Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0798 ATGGCAGTAGCAGATGAGCACTACCACAATGATAATAAGGAGCTTCAACCACTCCTTGTGTTTGGTCCTCCTTTAATCTTTCAAGTTTTTGAATCAAGAAATTCTCACAAGTACCTTTTCCTCAAAGCTTTCTCCTCTCAACTCCCTCTCCCCCAATTCCTTACCACCCAAAATGTAGACCCTTCATCCATCCGAACCATATTATGCAACCAACTCCAGCCGATCACTGCCAATGTCATTCGGCTCCTCCCATCACTTGCCCTCATTGTCACCACTACCGTCGGAAATGACCACATAGACTTGCCTGAGTGCAACCAACGTGGTGTTCAGGTTGTCAATGTTGGAGGCCAGACTACTGAGGATGTTGCTGACATGGCTGTTGGGTTGTTGATTGATGTCCTGTACAGAATTTCTGCTGCTGATCGATATGTTAGGAAATGGGTTCCATCTAAGCCGTGGAGCCTCCCTCGAGGTTCAAAGCTGGGAGGCAAGGGAGTTGGGATTGTTGGATTCGGAAGAATTGGCGGAGAAGTTGCTAAAAGGCTGGAAGCCTTCGATTGCAGAATTATGTACCATTCGCGGAAAAGGAAGCCATTTGTCTCATACCCTTTTTATTCTAATATTTTGGAGCTTGCCAGTAATAGTGATGTCCTTGTGCTGTGTTGTTCATTAACTGAGGAAACAAAGCACATGATCAACAGGGAAGTGATGTTGGCATTAGGTAAGGAAGGAGTTATCGTCAATGTTGGACGCGGAGCTCTAATTGATGAAAACGAATTGGTGCAGTGTTTGGTGATAGGGGAGATAAGGGGTGCTGGCTTGGATGTGTTTGAAAATGAGCCTAAAGTTCCCAAAGAGCTCATTACATTGGATAATGTTGTCCTATCACCACATGCTGCTGTATTGACTTCAGATTATTTCACTGATACATGCGAGTTTGTAGAAGAGAGTCTGTCTAAAAGCCTTCTTTTTTAA 975 0.4431 MAVADEHYHNDNKELQPLLVFGPPLIFQVFESRNSHKYLFLKAFSSQLPLPQFLTTQNVDPSSIRTILCNQLQPITANVIRLLPSLALIVTTTVGNDHIDLPECNQRGVQVVNVGGQTTEDVADMAVGLLIDVLYRISAADRYVRKWVPSKPWSLPRGSKLGGKGVGIVGFGRIGGEVAKRLEAFDCRIMYHSRKRKPFVSYPFYSNILELASNSDVLVLCCSLTEETKHMINREVMLALGKEGVIVNVGRGALIDENELVQCLVIGEIRGAGLDVFENEPKVPKELITLDNVVLSPHAAVLTSDYFTDTCEFVEESLSKSLLF 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0798 324 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 128 300 IPR006140 GO:0051287
Lal22g0798 324 PANTHER D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE FAMILY PROTEIN-RELATED 13 319 - -
Lal22g0798 324 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 65 127 IPR006139 GO:0016616|GO:0051287
Lal22g0798 324 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 166 193 IPR029752 -
Lal22g0798 324 Gene3D - 119 303 - -
Lal22g0798 324 Gene3D - 62 320 - -
Lal22g0798 324 CDD HPPR 16 318 - -
Lal22g0798 324 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 119 300 IPR036291 -
Lal22g0798 324 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 13 319 - -
Lal22g0798 324 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 64 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0798 Lal-Chr22 5864900 5868602 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0798 - K15919 lang:109340199 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0798 22 5864900 5868602 Lal22g0798 22 5864900 5868602 ECH