Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0789 ATGATAACAATTACTTCAGATCAATTTTGGTTTTTTAGACCCAAAATAGAAAGTAACATTATGGGAGCCAACTTTTCCAATTTAGAGTTTATTGATAAATCGCCAAAGCCATTATTTATCCTCACATTCCATTCCACTGCTAAATGGAAGCTTCACTTTGATGCAACCAAAGAAACAAACAAACTGATGGACTTCACTGCAACATGGTGTGGATCTTGCAAATACATGGACCCAATTATCAGAGATTTTGCTGCAAAATACACAGATGTGGAGTTCATTAAGCTTGATGTGGATGAGTTAATGGTTCAAGTATTGCCAACATTTATACTAATTAAGAAAGGGAAAGTTGTTGAAAAGGTGGTGGGAGCAAAAAAGGAGGTGCTGCAGAAGCTGATTGAGAAATGCAGGAACTGA 414 0.3647 MITITSDQFWFFRPKIESNIMGANFSNLEFIDKSPKPLFILTFHSTAKWKLHFDATKETNKLMDFTATWCGSCKYMDPIIRDFAAKYTDVEFIKLDVDELMVQVLPTFILIKKGKVVEKVVGAKKEVLQKLIEKCRN 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0789 137 CDD TRX_family 52 111 - -
Lal22g0789 137 ProSitePatterns Thioredoxin family active site. 62 80 IPR017937 -
Lal22g0789 137 SUPERFAMILY Thioredoxin-like 54 134 IPR036249 -
Lal22g0789 137 PANTHER THIOREDOXIN 21 137 - -
Lal22g0789 137 PANTHER THIOREDOXIN 21 137 - -
Lal22g0789 137 Gene3D Glutaredoxin 37 137 - -
Lal22g0789 137 Pfam Thioredoxin 57 133 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0789 Lal-Chr22 5791056 5801697 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0789 K03671 - gmx:100527691 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0789 22 5791056 5801697 Lal22g0789 22 5791056 5801697 ECH