Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0776 ATGGCACAAGCACAGGATGTAAGAACAAATACCGAATTTTCGAAGTTCGATCACTACTATGAAACCATCCAATCCAGAAAGAAATTACCAAAGACATTGCAGGAGACATTGACAGATGCATTTGCAAAGACTCCTGTTTCTTCTTTTCCAGGAGTTCCTGGAGGAAAAGTGATTGAAATTCTAGCATACACACCCGTTGGCGAAGCGGTTAAGATTCTATCCGAAAACAACATATTAGCTGCACCAGTTAAAGATCCAGAAGCAGGAGCTAATTCAAATTGGAGAGACAGGTACCTTGGCATCATAGATTATTCAGCTATCATTCTCTGGGTGCTGGAGAGTGCAGAACTTGCTGCAGCTGCTCTATCAGCCGGTACAGTCACGGCTGCAGGAGTTGGCACAGGAACAATTGGTGCTCTAGGAGCTCTAGCATTGGGAGTAACAGGTCCTGCTGCAATTGCTGGGCTTACTGCTGCTGCTGCAGGTGCTGCAGTGGCTGGTGGCATTGCTGTAAATAAAGGGATGGGTAAAGATGCTCCTCAAGTTGCTGATAATCTGGGTGGGGACTTCTACAAAGTAATACTGCAAGAAGAGCCTTTCAAGTCAACAACGGTAAAATCAATACTTAAACAATATCGGTGGGCTCCTTTTGTTCCGGTTGCAAGAAACAGCAGTATGTTGACTGTCATGCTGCTTCTCTCAAAATATAGGCTGAGAAATGTTCCTGTGATAGAACCAGGCAAACCTGAGATTGTGAACTTCATTACTCAGTCTGCAGTCATTCAAGGTCTCGAGGGATGCAAAGGAAGAGACTGGTTTGATTGCATTGCAGAGCGGCCTATATGTGATCTCGGACTTCCTTTTATGTCTCCTCATGAGGTTATCAGCGTCCCGGGCAATGACTTGATTCTTGAAGCTTTCAAGCAGATGAGGGATAATAAAATTGGTGGTCTTCCTGTAGTAGAGGGGCCAAAGAAGAGAATTGTTGGAAACTTGAGCATAAGAGATATCAGACACTTGCTGCTAAGGCCTGAGCTTTTCTCCAATTTTAGGAAGCTCACTGTGATGGATTTCATGAGCAAAATTGCCTCCATAAACCAAGAAGCTGGAAAAGTTACTAGACCCATAACATGCAAGGCTGACTCAACACTTCAGAGTGTGATCCATACTCTTGCTTCTCATTCTATTCACAGGATTTATGCAGTAAATGAACAAGAGGAAGTAATTGGAGTCATTACACTGAGAGATGTAATCTCTTGTTTCATCACTGAACCTTCTTACCATTTTGATGACTATTATGGATTTGCAGTGAAAGAGATGTTGAATCAGTGA 1332 0.4317 MAQAQDVRTNTEFSKFDHYYETIQSRKKLPKTLQETLTDAFAKTPVSSFPGVPGGKVIEILAYTPVGEAVKILSENNILAAPVKDPEAGANSNWRDRYLGIIDYSAIILWVLESAELAAAALSAGTVTAAGVGTGTIGALGALALGVTGPAAIAGLTAAAAGAAVAGGIAVNKGMGKDAPQVADNLGGDFYKVILQEEPFKSTTVKSILKQYRWAPFVPVARNSSMLTVMLLLSKYRLRNVPVIEPGKPEIVNFITQSAVIQGLEGCKGRDWFDCIAERPICDLGLPFMSPHEVISVPGNDLILEAFKQMRDNKIGGLPVVEGPKKRIVGNLSIRDIRHLLLRPELFSNFRKLTVMDFMSKIASINQEAGKVTRPITCKADSTLQSVIHTLASHSIHRIYAVNEQEEVIGVITLRDVISCFITEPSYHFDDYYGFAVKEMLNQ 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0776 443 ProSiteProfiles CBS domain profile. 289 348 IPR000644 -
Lal22g0776 443 Pfam CBS domain 289 342 IPR000644 -
Lal22g0776 443 Pfam CBS domain 373 419 IPR000644 -
Lal22g0776 443 Gene3D - 276 424 IPR046342 -
Lal22g0776 443 SUPERFAMILY CBS-domain pair 275 430 IPR046342 -
Lal22g0776 443 Gene3D - 11 267 IPR046342 -
Lal22g0776 443 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 12 442 - -
Lal22g0776 443 PANTHER BNAANNG38820D PROTEIN 12 442 - -
Lal22g0776 443 SMART cbs_1 374 422 IPR000644 -
Lal22g0776 443 SMART cbs_1 56 112 IPR000644 -
Lal22g0776 443 SMART cbs_1 293 342 IPR000644 -
Lal22g0776 443 SMART cbs_1 216 265 IPR000644 -
Lal22g0776 443 SUPERFAMILY CBS-domain pair 37 262 IPR046342 -
Lal22g0776 443 ProSiteProfiles CBS domain profile. 371 431 IPR000644 -
Lal22g0776 443 CDD CBS_pair_SF 292 418 - -
Lal22g0776 443 ProSiteProfiles CBS domain profile. 51 117 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0776 Lal-Chr22 5625244 5627637 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0776 - - gmx:100800376 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0776 22 5625244 5627637 Lal22g0776 22 5625244 5627637 ECH