Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0750 ATGGAGTTCAAGGGATCCACTTTGATTAAGCTTCTGCTGCTAACACAGTGCCTCACAGTTCTATGTGTTTCCCAAGATTTTGATTTCTTCTACTTAGTTCAGCAGTGGCCAGGATCATACTGTGACACAAAGAAGAGTTGTTGTTACCCTTCAACTGGAAAACCTGCTGCAAATTTTGGCCTTCATGGTCTCTGGCCTAATTACAATGATGGCTCTTACCCATCTAATTGTGACCCTAACAACCCCTTTGATCCATTTCAGGTATCTGATTTAACAAGGGAATTGCAAAGTGATTGGCCCACACTAGCATGCCCAAGCAACGATGGGATAAATTTCTGGACACATGAATGGGACAAACATGGGACTTGTTCAGAGTCAAATCTTAATCAGCATGATTATTTTGAAACTGCTCTTAAATTGAAACAACAAGCCAACCTCCTCAAAGCTCTGCAAAGTGCAGGAATAAACCCAGATGGAGGATCATACAGTTTAGAGAGCATAAAAGGAGCAATAAAGGATGGAATTGGATTTACTCCATATATTCAGTGCAATGTTGACACAGAAGGAAATAGCCAATTATATCAAGTATACTTGTGTGTTGACACTTCTGCTTCAAACTTTATTCAATGCCCTGTGTTCCCTAGAGGAAAATGTGGATCACATATTGAATTCCCAACTTTTTAA 684 0.3977 MEFKGSTLIKLLLLTQCLTVLCVSQDFDFFYLVQQWPGSYCDTKKSCCYPSTGKPAANFGLHGLWPNYNDGSYPSNCDPNNPFDPFQVSDLTRELQSDWPTLACPSNDGINFWTHEWDKHGTCSESNLNQHDYFETALKLKQQANLLKALQSAGINPDGGSYSLESIKGAIKDGIGFTPYIQCNVDTEGNSQLYQVYLCVDTSASNFIQCPVFPRGKCGSHIEFPTF 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0750 227 PANTHER RIBONUCLEASE T2 7 227 IPR001568 GO:0003723|GO:0033897
Lal22g0750 227 Gene3D - 21 227 IPR036430 GO:0003723|GO:0033897
Lal22g0750 227 SUPERFAMILY Ribonuclease Rh-like 21 226 IPR036430 GO:0003723|GO:0033897
Lal22g0750 227 ProSitePatterns Ribonuclease T2 family histidine active site 2. 112 123 IPR033130 -
Lal22g0750 227 PANTHER BNAA02G26660D PROTEIN 7 227 - -
Lal22g0750 227 ProSitePatterns Ribonuclease T2 family histidine active site 1. 59 66 IPR018188 GO:0003723|GO:0033897
Lal22g0750 227 Pfam Ribonuclease T2 family 27 210 IPR001568 GO:0003723|GO:0033897
Lal22g0750 227 CDD RNase_T2_euk 27 218 IPR033697 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0750 Lal-Chr22 5371778 5373618 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0750 K01166 - gmx:100782011 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0750 22 5371778 5373618 Lal22g0750 22 5371778 5373618 ECH