Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0748 ATGAATAAATTATATGGAGGAGTTCTGGTTACCTCATCTTTTATGTTGTTTATGCTTATGGTTCTGCGATACGGGGTCATGAAAAATCCTGTTGGTGGAGGTTATCTGACCATACCTCTCACCATTAATGGTACTAATCCTCTAGAATGGATAAATCCTGTGGTTCCGCCTGCTGTTCAGAATCCAGACAGTGACTCTCAAGTTATTTCTACTGATATTCTAATGTATGGCCTCTTTGCTGGGAGTAACTTTTCCAATGAAGAGCAACAATCTCTGCAGACATGGAAGCGATTGAAAAACTTACTTGATCATGCTCAGGGTTTACCTAATGCAGCAGGAGCTATCAAAGAAGCTACCAGTGCATGGAATAGTCTTGTTTCCTCAATTGAAGAACAAAGACAAGGCCGTGCAAATGATAGTTCGAGAACTAAAGAGAAACAGTGTCCTCATTTTCTTAATAAAATGGATTCCACTGAACTTGGTAATAGTAGTTACAAACTGCAGGTACCTTGCGGTCTGACACAGGGTTCTTCCATCACTGTATTTGGCATTCCAAATGGTCTCCTAGGTGATTTTCGGATCGACTTGACTGGAGAACTACTTCCTGGGGAGCCTGATCCCCCTATTATTTTGCACTATAATGTTAGGCTTCATGGTGATAAAATCACTGAAGATCCAGTTATTGTCCAAAACTCCTGGACAGTAGCTAAAGATTGGGGCGAAGAGGAGCGTTGTCCATCCCCCACTCCTGAAAAAGTTAATAAAGTCGATGAGTTGGATCAGTGCAGTAAGAATGTAGGGAAAAACATTAGCCAACATTACACAGCCAGCATACATTCCCACACTTCAAGGAAATTTTCAGCAGCAGAAGTACAATCAGAAAATAAGAAATACTTCCCCTTTAAACAAGGTTACCCATTTGTTGCAACTCTTAGAGTGGGATCAGAGGGAATCCAGATGACAGTTGATGGAAAGCACATAACTTCATTCGCTTTCCGTGAAACTTTGGAGCCATGGCTTGTCAGTGAGGTAAAAATCTCAGGGGACCTCAAGTTAATTTCTGTTCTTGCCAGTGGTCTGCCGTCATCAGAGGATTCAGAGCATATTATTGATCTTGAATCTTTGAAAGCAAGCCCTATATCTGCACAGACTTCATTGGATCTCCTCATTGGTGTTTTCTCTACCGCTAACAATTTTAAGCGTCGGATGGCTGTTAGAAGAACCTGGATGCAGTACAATGCTATTAGATCAAATACAACGGCTGTGCGCTTCTTTGTTGGTTTACATAAAAGCCAGATAGTTAATGAAGAATTGTGGAAAGAAGCACAAACCTACAGAGACATACAGTTAATGCCATTTGTTGACTACTACAGCCTCATCACGTGGAAATCTTTAGCAACCTGCATTTTTGGGACGGAGGTTGTTTCAGCGAAGTTTGTTATGAAGACAGATGATGATGCATTTGTTCGTGTGGATGAAGTGCTAGGCTCTTTAAAAAGGATCGATGTGGCCCATGGGTTGCTGTATGGCCTCATCAATTCAGATTCCAAACCTCATCGAAATTCTGATAGCAAATGGTACATCAGCCCGCAGGAATGGAGCGAAGCAACCTATCCTCCTTGGGCACACGGTCCCGGATATGTGATCTCACATGATATAGCAAACACAGTGTACAGGAAATACAGAGAGGGCCATTTGAAGATGTTTAAGCTAGAAGACGTTGCAATGGGAATCTGGATCGCAGATATGAAGAAGGAAGGTCTAGAAGTTCGATACGAGAATGAAGGCAGAGTCTACAATGAGGGTTGCAAGGATGGCTACGTGGTTGCCCATTATCAAGGTCCTAGGGAGATGCTGTGTTTATGGCAGAAACTTCAGGAAGGAAAAGGTGCAAAATGCTGTGGTGATAGGAGATGA 1917 0.4231 MNKLYGGVLVTSSFMLFMLMVLRYGVMKNPVGGGYLTIPLTINGTNPLEWINPVVPPAVQNPDSDSQVISTDILMYGLFAGSNFSNEEQQSLQTWKRLKNLLDHAQGLPNAAGAIKEATSAWNSLVSSIEEQRQGRANDSSRTKEKQCPHFLNKMDSTELGNSSYKLQVPCGLTQGSSITVFGIPNGLLGDFRIDLTGELLPGEPDPPIILHYNVRLHGDKITEDPVIVQNSWTVAKDWGEEERCPSPTPEKVNKVDELDQCSKNVGKNISQHYTASIHSHTSRKFSAAEVQSENKKYFPFKQGYPFVATLRVGSEGIQMTVDGKHITSFAFRETLEPWLVSEVKISGDLKLISVLASGLPSSEDSEHIIDLESLKASPISAQTSLDLLIGVFSTANNFKRRMAVRRTWMQYNAIRSNTTAVRFFVGLHKSQIVNEELWKEAQTYRDIQLMPFVDYYSLITWKSLATCIFGTEVVSAKFVMKTDDDAFVRVDEVLGSLKRIDVAHGLLYGLINSDSKPHRNSDSKWYISPQEWSEATYPPWAHGPGYVISHDIANTVYRKYREGHLKMFKLEDVAMGIWIADMKKEGLEVRYENEGRVYNEGCKDGYVVAHYQGPREMLCLWQKLQEGKGAKCCGDRR 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0748 638 Pfam Galactoside-binding lectin 165 356 IPR001079 GO:0030246
Lal22g0748 638 Pfam Galactosyltransferase 400 584 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lal22g0748 638 SMART Gal_bind_lectin_2 169 357 IPR001079 GO:0030246
Lal22g0748 638 SMART galectin_3 165 358 IPR001079 GO:0030246
Lal22g0748 638 Gene3D - 379 601 - -
Lal22g0748 638 SUPERFAMILY Concanavalin A-like lectins/glucanases 165 358 IPR013320 -
Lal22g0748 638 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 64 627 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lal22g0748 638 CDD GLECT 165 355 IPR001079 GO:0030246
Lal22g0748 638 PANTHER - 64 627 - -
Lal22g0748 638 Gene3D - 157 356 - -
Lal22g0748 638 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 165 358 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0748 Lal-Chr22 5351408 5357376 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0748 1 634 Glycosyltransferase AT1G26810 62.150 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0748 K14413 - gmx:100782548 1102.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0748 22 5351408 5357376 Lal22g0748 22 5351408 5357376 ECH