Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0738 ATGTCCAGCTTCACTCATGCCACTACACTACTCCATGCTCACATCAAAACCAAGCACAAAACCACCACCAACAACAACCCTTTACCTCTTAACAAAGCACCCTATGATGTACAAAATAATGTGACCAACAGAAGGAAATTGATTTCAACATTCCTAGCCACTTCAGTGGCAGTGTTGGGAATGCAGGGCACCCCACTAGCACTAGCCCAGAACTGGGGCACTAGGTCCTTCCTAAGGGAACATTTCTTTGAGCCAGGGCTGTCCCCTGAAGATGCAGTGGCTAGAATAAAGCAAACTGCTGAAGGGTTACATAGTATTAGGGACATGTTGGAAACCATGTCTTGGAGGTATGTCATGTTTTATATTCGGTTAAAACAGGCTTATCTTGACCAGGACTTGAAAAATGCTCTTAGCATGTTGCCCGAAAATCGTCGCAAGGAGTATGTTAAAACTGCTAATGAATTGGTGGATAACATGGCTGAGTTTGATCGGTATGTTCGGTCGCCGAAGGTATATGAATCATACCTATACTATGAGAAGACATTGAAATCAATAGATGAACTTGTTGCTATGTTAGCATAG 582 0.4296 MSSFTHATTLLHAHIKTKHKTTTNNNPLPLNKAPYDVQNNVTNRRKLISTFLATSVAVLGMQGTPLALAQNWGTRSFLREHFFEPGLSPEDAVARIKQTAEGLHSIRDMLETMSWRYVMFYIRLKQAYLDQDLKNALSMLPENRRKEYVKTANELVDNMAEFDRYVRSPKVYESYLYYEKTLKSIDELVAMLA 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0738 193 SUPERFAMILY Oxygen-evolving enhancer protein 3, 82 193 IPR023222 -
Lal22g0738 193 Gene3D - 53 193 IPR023222 -
Lal22g0738 193 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 69 193 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Lal22g0738 193 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 1 193 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Lal22g0738 193 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 2, CHLOROPLASTIC 1 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0738 Lal-Chr22 5279117 5280640 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0738 K08901 - qsu:112005575 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0738 22 5279117 5280640 Lal22g0738 22 5279117 5280640 ECH