Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0608 ATGAAGGATTTGAATTCGGATCTGTTTGACCCGGTTATGGTTATGGAATCTGAGTGGTCTCGCGCTGGTTCCGCTTCTGATTCCGATTTCGGATTCGCCTTCAATGACAGAAACTTCTCCGACCGGGTTCTCCGCATCGAGATCATGGGCGACCTGGATGATACTCGACAGGATTCCGGCCGTTGCACCACCGTCGCCGATTGGGCCCGCCACCGCAAGAGGAGACGCGAGGATATCAGAAAGGATAACGATGTGGATCTTTCTTTACTGCCTGACGAGCAAGTTTTGAATGGGAACCAACCTGATATCGATGATTGTGCAGCATATGAAAATCAAGATGAAGAGGGTCAAGAGGCTGTTGCAATGATTGAAGAATCCCCTTCAGGTTTTTTCCTAGGGTTTGAGTTTGTTGGCAATAAAATAGGTATGTTTACCTTAAGCATGAAGTTGTCATTTCTGCTGTATGATTTAACTTTGAGGTTGGCCATGGCTAATATAGGTGATGAAACTGCAAATAGCAATGACAATGGTTGGAGCATGGGTTGGTCTGCAGTAATGAGAGTTAAAACACTGCATATCAGTTCTCCCATCTTAGCTGCTAAAAGTCCTTTTTTCTATAAGCTCTTCTCAAATGGGATGAGGGAGTCAGAAGAGAGATATGTCACTCTGAGAATTAATGCCTCTGAAGAAACTGCCCTCATGGAGCTACTGAATTTTATGTACAGTAATACCTTGAACACTACTACAGCATCTGATTTGCTGGATGTATTGATGGCTGCTGATAAATTTCAAGTTGCTTCTTGCATGAGATATTGTAGCCGGTTATTGCGAAGTATGCCCATGACACCCGAATCTGCCTTGCTATACCTGGAGCTTCCTTCTAGTGTCTTAATGGCTGATGCAGTCCAACCACTGACTGATGCAGCAAAGCAGTATCTTGCTGGTCGATACAAAGATATAACCAAGTTTCAGGATGAGGTCATGGCCTTGCCCCTAGCTGGAGTAGAGGCGATATTATCTAGTGATGATCTCCAGGTTGCATCAGAAGATGCTGTATATGACTTTGTGTTGAAGTGGTCTAGAAGCGAATACAGCACACTGGAAGAAAGGCGAGAAGTCCTGGGTGCACGGCTTGCACGTTTAATTCGTTTCCCTTACATGACCTGCCGAAAGCTTAAGAAGGTCTTAACCTGCACTGACTTTGAGCATGATGTTGCGTCCAAGCTTGTACTTGAGGCCTTATTTTTCAAGGCTGAGGCTCCACACCGCCAACGGTCACTGGCAGCAGAAGAGTCTGGTTCCTTGAACCGTCGTTTTGTGGAGCGGGCATACAAGTATCGTCCTGTTAAGGTGGTAGAATTTGAACTTCCTCGACAGCAGTGTGTGGTGTACCTTGATCTAAAGCGGGAGGAGTGTGCCAATCTGTTTCCATCTGGCCGGGTTTATTCTCAGGCATTCCATTTGGGCGGGCAAGGGTTTTTTCTCTCAGCACATTGCAACATGGACCAACAGAGTTCTTTCCATTGCTTTGGGTTGTTTTTGGGAATGCAGGAAAAGGGCTCAGTTAGCTTTGCTGTTGACTATGAATTTGCTGCAAGGTCTAGGCCAACTGAGGAATTTGTTAGCAAGTACAAGGGCAATTACGTATTCACTGGGGGAAAGGCGGTTGGCTATAGAAACTTGTTCGCAATTCCATGGACTTCGTTCATCGCCGAGGACAGTCTTTACTTCATTAACGGCGTCCTCCACCTTAAAGCCGAGCTCACCATCAGACATTGA 1779 0.4592 MKDLNSDLFDPVMVMESEWSRAGSASDSDFGFAFNDRNFSDRVLRIEIMGDLDDTRQDSGRCTTVADWARHRKRRREDIRKDNDVDLSLLPDEQVLNGNQPDIDDCAAYENQDEEGQEAVAMIEESPSGFFLGFEFVGNKIGMFTLSMKLSFLLYDLTLRLAMANIGDETANSNDNGWSMGWSAVMRVKTLHISSPILAAKSPFFYKLFSNGMRESEERYVTLRINASEETALMELLNFMYSNTLNTTTASDLLDVLMAADKFQVASCMRYCSRLLRSMPMTPESALLYLELPSSVLMADAVQPLTDAAKQYLAGRYKDITKFQDEVMALPLAGVEAILSSDDLQVASEDAVYDFVLKWSRSEYSTLEERREVLGARLARLIRFPYMTCRKLKKVLTCTDFEHDVASKLVLEALFFKAEAPHRQRSLAAEESGSLNRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSRPTEEFVSKYKGNYVFTGGKAVGYRNLFAIPWTSFIAEDSLYFINGVLHLKAELTIRH 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0608 592 SUPERFAMILY TRAF domain-like 479 590 - -
Lal22g0608 592 Gene3D - 312 418 - -
Lal22g0608 592 SMART BACK_2 295 397 IPR011705 -
Lal22g0608 592 ProSiteProfiles BTB domain profile. 189 249 IPR000210 GO:0005515
Lal22g0608 592 SUPERFAMILY POZ domain 190 277 IPR011333 -
Lal22g0608 592 Gene3D Potassium Channel Kv1.1; Chain A 153 300 IPR011333 -
Lal22g0608 592 CDD BTB_POZ_ZBTB_KLHL-like 189 263 - -
Lal22g0608 592 SMART BTB_4 182 280 IPR000210 GO:0005515
Lal22g0608 592 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN POB1 6 592 - -
Lal22g0608 592 Pfam BTB/POZ domain 190 277 IPR000210 GO:0005515
Lal22g0608 592 PANTHER OS02G0260700 PROTEIN 6 592 IPR045890 -
Lal22g0608 592 Pfam BTB And C-terminal Kelch 303 395 IPR011705 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0608 Lal-Chr22 4263301 4267846 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0608 - - gmx:100817612 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0608 22 4263301 4267846 Lal22g0608 22 4263301 4267846 ECH