Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0600 ATGAAGACATCTCCATCATTAGTCTTCATAATTTCTTTACTTGGTTCATTCTTTCTTGCAAGTCCACAAGGAGACTCATGTTCCAGAAATCTAAAGCTCAAAGTTCCTATTCCTTTTGCTACCACCAACCTTCACTGCCTTTCTGTTTGGGATGCTCAAGGCTTCATCCTCAGGCAGTATGTTCAAACTTCTAAAAACACTTGGAGCTTCATCCTCTCAACCCCAGACAGAAATTCTTACATAGGTATGGGATTCTCAGCCACCGGCAGCATGGTGGGTTCAAGTGCTATTGTGGGGTGGGTGGCATCAAGAGGAAGCAGTGGAGGGATAAAGCAGTATTATCTAGGTGGGGTTACACCAAATCAGGTGGTTCCAGATAAAGGTAACTTACAAGTTATTGGAAACTCAACCTTCATCACTTTACAATCCTCTCGTTTGTACATGGTGTTTCAGTTAGAAACTACTACTGATGAACCTTTGTCATGGCTCATATATGCTACTGGATCAACTGGTTTATTCCCTTCAGCACCAGATTATGCTCTAACCAAACACCTTCACAAGGTTTCCATAAGAATAGACTACTCAAAAGCCAACCTTGGAAGTTCACAAGTGGATGAAAGTTCATCATCATCACAAGGAATTGGGAGTAGTAGTTCACAACAAGACTCATGTGACTCTAAGCTAAACCTTAATGTTCCACTCTTCTTTGACATAACACAACTCAATTGTCTTCCTGTTTGGAATGCTCAAGGATTCATCCTTAGATATACTCAGAGTTCTCCAAACATATGGAGCTTCATTCTCTCAGCACCAAATCCAAATTCATACATAGCAATAGGGTTCTCTCCAAATGGAGGCATGGTGGGTGCAAGTGCTATTGTGGGGTGGATCTCATCAAGTGGAGCTGGTGGAGGCATGAAGCAGTATTATCTAACAGGACTTGCACCAAACCAAGTGGTCCCAGATAGAGGCAACTTACAAGTTCTCAGAAACTCAACCTTAATCACATCACAATCCTCACGTTTGTACATGGTCTTCCAGTTACAAACCAACCACCCTTTACCTCGCTTGATTTATGCCATTGGACCTAATGCTATCTTCCCTTCAATACCAAGTTTTGCACTAGCCAGACATCAAGACAAAGCTTCCATTTTTGTGAATTACGCATCAGGTTCAAGTGCATCAGGAAATCCAAGTATGAACCTGAAAAGAAGGCATGGAGTGTTGAATATATTGGGATGGGGTATCCTAATTGTAATGGGTGCAATAGTTGCTCGCCACTTCAAGGAATGGGATCCATTTTGGTTTTATTTCCATGCTTCAGTTCAAACATTGGGTTTTGTCTTAGGACTAATTGGTGTTATTACTGGGCTTGTCCTAAATAATCAACTACAATTTGATGTTAATATTCACAAGGCTATTGGAATCATCATTCTTGTGTTAGCTTGTCTCCAGATGATGGCCATTCTAGCTAGACCAAAGAAGGAATCAAAAGCTAGAAAGTATTGGAATTTATATCATCATAACATAGGGAGAGTTTTAATAATATTAGCCATAGCTAATATTTTCTATGGAATTCATTTAGGTAGAGAAGGAAGTGGATGGAAGGTGGGTTATGGAATTGTGCTTGCCATATTACTCTTTATTGCAATTATATTTGAGACAAGACTTTGGAGTAGAGACTAA 1686 0.4009 MKTSPSLVFIISLLGSFFLASPQGDSCSRNLKLKVPIPFATTNLHCLSVWDAQGFILRQYVQTSKNTWSFILSTPDRNSYIGMGFSATGSMVGSSAIVGWVASRGSSGGIKQYYLGGVTPNQVVPDKGNLQVIGNSTFITLQSSRLYMVFQLETTTDEPLSWLIYATGSTGLFPSAPDYALTKHLHKVSIRIDYSKANLGSSQVDESSSSSQGIGSSSSQQDSCDSKLNLNVPLFFDITQLNCLPVWNAQGFILRYTQSSPNIWSFILSAPNPNSYIAIGFSPNGGMVGASAIVGWISSSGAGGGMKQYYLTGLAPNQVVPDRGNLQVLRNSTLITSQSSRLYMVFQLQTNHPLPRLIYAIGPNAIFPSIPSFALARHQDKASIFVNYASGSSASGNPSMNLKRRHGVLNILGWGILIVMGAIVARHFKEWDPFWFYFHASVQTLGFVLGLIGVITGLVLNNQLQFDVNIHKAIGIIILVLACLQMMAILARPKKESKARKYWNLYHHNIGRVLIILAIANIFYGIHLGREGSGWKVGYGIVLAILLFIAIIFETRLWSRD 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0600 561 Pfam Eukaryotic cytochrome b561 406 526 IPR006593 -
Lal22g0600 561 SMART 561_7 405 526 IPR006593 -
Lal22g0600 561 SMART DOMON_3 80 168 IPR005018 -
Lal22g0600 561 SMART DOMON_3 276 362 IPR005018 -
Lal22g0600 561 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 215 560 - -
Lal22g0600 561 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 17 203 - -
Lal22g0600 561 MobiDBLite consensus disorder prediction 201 224 - -
Lal22g0600 561 PANTHER BNAC01G39800D PROTEIN 215 560 - -
Lal22g0600 561 PANTHER BNAC01G39800D PROTEIN 17 203 - -
Lal22g0600 561 ProSiteProfiles Cytochrome b561 domain profile. 369 561 IPR006593 -
Lal22g0600 561 CDD Cyt_b561_FRRS1_like 380 554 - -
Lal22g0600 561 ProSiteProfiles DOMON domain profile. 250 362 IPR005018 -
Lal22g0600 561 CDD DOMON_DOH 250 383 IPR045266 -
Lal22g0600 561 Gene3D - 381 557 - -
Lal22g0600 561 CDD DOMON_DOH 45 175 IPR045266 -
Lal22g0600 561 ProSiteProfiles DOMON domain profile. 53 168 IPR005018 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0600 Lal-Chr22 4229593 4235494 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0600 - - lang:109356980 991.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0600 22 4229593 4235494 Lal22g0600 22 4229593 4235494 ECH