Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0585 ATGGGAAGAGTTAAGCATACCCCAGCTTCTCTTGGTGGACCTCATAGAAGGAAAGCAAAATCAACACCACAGCCTGCTCGTAGAAGGCAGAAGAATGCCACAGAAGGGGATTCACAGACACCTGAGACTGAGGGCCGCAAAAAAAGGCGCTCTAGACCAGGATCAGTGGCTCTTCGTGAGATTCGTCACTTTCAGAAGACTTTCAACTTACTTATCCCTGCTGCCCCCTTTATAAGATGTGTCAAACAAATAACAAACATATTTTCTAGGGAGGTTTCTCGCTGGACACCTGAAGCAATGGTGGCACTTCAGGAGGCAGCCGAGGATCTTCTGGTTCATTTGTTTGAAGATGGAATGCTCTGTGCAATTCATGCAAGGCGTATTACTCTTATGAAGAAGGATTTCGAGTTGGCCCGTAGGCTTGGAGGTGTAGGAAGACCTTGGTAG 447 0.472 MGRVKHTPASLGGPHRRKAKSTPQPARRRQKNATEGDSQTPETEGRKKRRSRPGSVALREIRHFQKTFNLLIPAAPFIRCVKQITNIFSREVSRWTPEAMVALQEAAEDLLVHLFEDGMLCAIHARRITLMKKDFELARRLGGVGRPW 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0585 148 Gene3D Histone, subunit A 13 144 IPR009072 GO:0046982
Lal22g0585 148 MobiDBLite consensus disorder prediction 30 58 - -
Lal22g0585 148 MobiDBLite consensus disorder prediction 1 58 - -
Lal22g0585 148 PANTHER HISTONE H3 21 148 IPR000164 GO:0000786|GO:0003677|GO:0030527
Lal22g0585 148 Pfam Core histone H2A/H2B/H3/H4 20 141 IPR007125 GO:0003677
Lal22g0585 148 PRINTS Histone H3 signature 43 64 IPR000164 GO:0000786|GO:0003677|GO:0030527
Lal22g0585 148 PRINTS Histone H3 signature 90 108 IPR000164 GO:0000786|GO:0003677|GO:0030527
Lal22g0585 148 PRINTS Histone H3 signature 108 124 IPR000164 GO:0000786|GO:0003677|GO:0030527
Lal22g0585 148 PRINTS Histone H3 signature 124 145 IPR000164 GO:0000786|GO:0003677|GO:0030527
Lal22g0585 148 SMART h35 43 146 IPR000164 GO:0000786|GO:0003677|GO:0030527
Lal22g0585 148 SUPERFAMILY Histone-fold 19 143 IPR009072 GO:0046982
Lal22g0585 148 PANTHER HISTONE H3-LIKE CENTROMERIC PROTEIN HTR12 21 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0585 Lal-Chr22 4061385 4065276 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0585 K11253 - gmx:100811872 206.838