Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0552 ATGCCATTTTTATGCTTGAAGGATATGTCATACAAATTAGTCTTTCTCTTTCTTTTTTTCTATGTAGTGGTTTCTACTCCCCCAGAGGATCCAATAAATTGTTCTTCACAGAACACAAGCTGCACTGTCACAAACTCCTATGGCATATTCCCTGATAGAACCACATGCCATGCTTCTGAAGTATTGTACCCAACAAATGAAGCTGAACTTGTGTCAATGGTTGCATCAGCAAGTAAAAACAAAAGGAAAATGAAAGTTGCAACACGTTTTTCCCATAGCATACCAAAGCTGGTGTGCCCTGAGGGCCAAAATGGGGTGCTTATAAGCACAAAATATCTGAACAAAGTTTTGAAGATTGATTTGGAAGCAAGGACAATGACTGTGGAGAGTGGTGTGACATTGAAACAGATTATCAATGAGGCTTCAAATGCAGGGTTGGCTTTGCCTTATGCCCCTTATTGGTGGGGTTTAACAATTGGTGGCCTTATGGGAACTGGTGCTCATGGAAGCACTTTGTGGGGTAAAGGGAGTTCAGTTCATGATTATGTTGTGGAACTTAGAATTGTTAGGCCTTCAGGTCCTGAAGAAAATGAATATGCTACAGTTCTGACCCTAAATGAATATCATGAAGATTTCAATGCTGCAAAAGTTTCACTTGGTGTGCTAGGTGTTATTTCACAGATTACCCTAAAATTAGAACCTCTGTTCAAGAGATCCATCACCTATTTAACAAAAGATGATTCAGATTTGGGTGACAAAGCAGCTTCTTTTGGACATGAACATGAGTTTGCGGATATAACGTGGTACCCAAGTCAACATAAGGCTGTCTATCGTGTTGATGATCGTGTCCCCATTAATACTTCGGGGAATGGTCTTTATGACTTTATTCCTTTTCGTCCCACTTCTTCCTTTGAATTGGCACTCATAAGAAGTGCAGAGGATCTTCAAGAATCCACTAATGATGCTAATGGAAAGTGCTTACTTGCAAAGACAACAACTGCTACCCTTATTACCACTGCTTATGGACTTACTAACAATGGTGCATTCTTTACTGGATACCCAGTAATTGGATTTCAGAATCGCCTTCAATCATCTGGGACATGCTTGAATAGTCTTAAAGATGGAAAATTCACAGCATGTCCATGGGACTCTAGGATCAAAGGAGAGTTCTTTCATCAAACCACATTTAGCATTAGCTTATCCTTTGTAAAAGATTTTATTCAAGATGTGCAAAAGCTAGTTCAATTGGAACCAAAGGGAATGTGTGGAATAGAGCAATATAATGGAATTCTGATGCGTTATGTGAAGGCTTCAAGTGCATATTTGGGTAAGCAAGAGGATGCTATAGACTTTGATATCACTTACTACCGTAACAAGGACCCAATGACTCCTAGGCTCTATGAGGACATTATTGAAGAGATTGAGCAACTTGGGATATTCAAATATGGAGGGATACCACATTGGGGAAAGAATAGGAACTTGGCATTTGAAGGAGTGATTAAGAAGTACAAAAGTGCTAGGAAATTTTTTATGGTTAAAGAGGTTTATGACCCACAAGGGCTTTTCTCTAGTGAGTGGACAGACCAAATGCTTGGGTTAAAAGAAGGTGTGACAATATTGAAGGATGGGTGTGCATTAGAAGGTTTATGTATTTGCTCACAGGATAGCCACTGCAATCCAAACAAAGGTTACTTTTGTAGACCAGGCAAAGTGTATAAGGAAGCAAAGGTTTGTACCCATCAATAG 1746 0.3946 MPFLCLKDMSYKLVFLFLFFYVVVSTPPEDPINCSSQNTSCTVTNSYGIFPDRTTCHASEVLYPTNEAELVSMVASASKNKRKMKVATRFSHSIPKLVCPEGQNGVLISTKYLNKVLKIDLEARTMTVESGVTLKQIINEASNAGLALPYAPYWWGLTIGGLMGTGAHGSTLWGKGSSVHDYVVELRIVRPSGPEENEYATVLTLNEYHEDFNAAKVSLGVLGVISQITLKLEPLFKRSITYLTKDDSDLGDKAASFGHEHEFADITWYPSQHKAVYRVDDRVPINTSGNGLYDFIPFRPTSSFELALIRSAEDLQESTNDANGKCLLAKTTTATLITTAYGLTNNGAFFTGYPVIGFQNRLQSSGTCLNSLKDGKFTACPWDSRIKGEFFHQTTFSISLSFVKDFIQDVQKLVQLEPKGMCGIEQYNGILMRYVKASSAYLGKQEDAIDFDITYYRNKDPMTPRLYEDIIEEIEQLGIFKYGGIPHWGKNRNLAFEGVIKKYKSARKFFMVKEVYDPQGLFSSEWTDQMLGLKEGVTILKDGCALEGLCICSQDSHCNPNKGYFCRPGKVYKEAKVCTHQ 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0552 581 Gene3D - 115 234 IPR016169 -
Lal22g0552 581 Gene3D - 393 493 - -
Lal22g0552 581 SUPERFAMILY FAD-binding/transporter-associated domain-like 51 234 IPR036318 GO:0050660
Lal22g0552 581 TIGRFAM pln_FAD_oxido: plant-specific FAD-dependent oxidoreductase 27 579 IPR010030 -
Lal22g0552 581 Pfam FAD binding domain 61 193 IPR006094 GO:0050660
Lal22g0552 581 PANTHER D-ARABINONO-1,4-LACTONE OXIDASE-LIKE PROTEIN 11 580 - -
Lal22g0552 581 Pfam D-arabinono-1,4-lactone oxidase 392 529 IPR007173 GO:0003885|GO:0016020
Lal22g0552 581 ProSiteProfiles PCMH-type FAD-binding domain profile. 54 235 IPR016166 GO:0071949
Lal22g0552 581 PANTHER GULONOLACTONE OXIDASE 11 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0552 Lal-Chr22 3750296 3755517 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0552 K00103 - gmx:100790483 969.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0552 22 3750296 3755517 Lal22g0552 22 3750296 3755517 ECH