Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0538 ATGTCGGGTCGATTGGTGAAGAAGGTTTTGAATGAGAAACACCTTTCTCAACAATTCAGCGTAGTTGAAGAATATGATGTTGAAGATGAAGAAGAAGAGCTCAACGATTCCACCAATCGTTCTTCAATTAACCACTTCGACCTCCTCAATGACGACCCTGAATACCAGGGAGAGGAGTTGGAGTTGGAGTCCGCCAAAGAAATCTTGACCAGCTATGACGATAAAGAGGAGCCATCTTCATTGAAAAATAATGATGCGGTTACGACATCCAATTCTAGATCAAAGAAAAAGAAAAAGAAGAAAAACAAGGATGGTTCTGTTGCCAATAGGACGGGTGGTGAGAAAGAACTAGACTCAATTCTAGAAGATTTATCTCTGGATGTCAACTCTTCTAGTGAGCCACATGTCTCTTCAAAAGGCAGAGCAGCGAATGCCGAAGACCAAAATAAATCGGTTAAACAACATGTATCCTCTGTATTGCAAGTGGATCCTAAATATTTGAATGCCGAAAATGAGCTAAGGAGAATATTTGGATCTAAGGTTGTGAAATCATTTGAGAGTCAGACTAGTAATCAAGCGAGCAGTTCTAGGCAGATACGAGGGGTTAGGCGTGGACACTATAATCTTAGAAAGACTGTTCTTGTCACTCCAGCAATTCATTGGCCCCGGTGGGACGGTTCTCTGTCCATGGAATTTCTGGAAACAAAGAATGGGTACAACCACTTCAAATATGCACACTCATCATCCTATTCCCAAGCTCAGAGCGCTTTTGAAGCTACCAAAGCAATTAATGACTTAAATGGCATAGCAAGCATATTAATGCACCATCCTTATCATCTTGATTCACTTCTAACAATGGCAGAGTATTTCAAGGTAGTGGGTGAACAACAAATGTCTGCTGATGCTATTGGCAAGTGTTTGCATGCCCTTGAATGTGCATGGAATCCTATGTTCACTCCACTGCAGGGTAATTGCCAATTGAAGTTCAACCATGATACGAATAAACCTATCTTTACAGCGCTTTTCACTCACATGAAAAACTTGGATAGGCGTGGCTGTCATAGATCAGCTTTAGAGGTTTGCAAACTGTTACTTTCTCTGGATTCAGATGACCCCATGGGGGCTATTTTCTGCCTTGACTATTTTTCTTTAAGAGCTGAGGAGTATGCATGGTTGGAAAAGTTTTCTGAAAATTATCAAAGTGATAACTCCATTTGGCTGTTTCCAAATTTTTCTTATTCCCTTGCCATCTGTCGGTTTTACTTGGAACGTGAGACCTCCAAAGATGCTTGTGTCGATGCTAAAAAATCTTCTTCATTGGATCTTATGAAACAAGCATTGATGCTGCATCCTTCAGTTATAAAGAACTTAGTGGAAAAAGTACCGTTGAAGGATCGTACATGGACTGTTATTCTTAAACATGCCTTTTTCCGATCGGACCAAACAAAAATTATGTCTCAAGATCATTTGATTAATATATATGTTGAGAGAAGTTATCTTATATGGAGGCTTCCTGATCTACAAAAGTTGTTGAGTGATGCTGCGCAGCTAGTCATGGAAACCCTAGAAAATAATAAAAGTGAAATTAAGGATTGGGCTTGTGCTAGGAAAGTAGCATTTTCATCTGAGAAAAATGAGTATGGACATTTGTTGGTGTCTGATTTCTCTGACAAAGTGGCATCCATACCACAAGAAAATCTGCAACAATTTATGGGTCCTCCAGGGATGAGGGAGGGTATGCTGGATGAGAACCAATTTGCTAATCTGCAAGTCCATGGCAATGGTAATGGCAATGGCAATGGTCTGGCTCCTCGCGGCGTTGCAAATCGGAATGCCTTAGCCGTCTTGTTTGAATCAATGCTACCATGGGTTACTTATGAGGATGGTGAACTTGATGGTAACCAGCATGAGCATGATGATGATCACGGTCAAAACAATCAATGA 1944 0.4064 MSGRLVKKVLNEKHLSQQFSVVEEYDVEDEEEELNDSTNRSSINHFDLLNDDPEYQGEELELESAKEILTSYDDKEEPSSLKNNDAVTTSNSRSKKKKKKKNKDGSVANRTGGEKELDSILEDLSLDVNSSSEPHVSSKGRAANAEDQNKSVKQHVSSVLQVDPKYLNAENELRRIFGSKVVKSFESQTSNQASSSRQIRGVRRGHYNLRKTVLVTPAIHWPRWDGSLSMEFLETKNGYNHFKYAHSSSYSQAQSAFEATKAINDLNGIASILMHHPYHLDSLLTMAEYFKVVGEQQMSADAIGKCLHALECAWNPMFTPLQGNCQLKFNHDTNKPIFTALFTHMKNLDRRGCHRSALEVCKLLLSLDSDDPMGAIFCLDYFSLRAEEYAWLEKFSENYQSDNSIWLFPNFSYSLAICRFYLERETSKDACVDAKKSSSLDLMKQALMLHPSVIKNLVEKVPLKDRTWTVILKHAFFRSDQTKIMSQDHLINIYVERSYLIWRLPDLQKLLSDAAQLVMETLENNKSEIKDWACARKVAFSSEKNEYGHLLVSDFSDKVASIPQENLQQFMGPPGMREGMLDENQFANLQVHGNGNGNGNGLAPRGVANRNALAVLFESMLPWVTYEDGELDGNQHEHDDDHGQNNQ 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0538 647 PANTHER NULP1-RELATED 1 644 IPR006994 -
Lal22g0538 647 MobiDBLite consensus disorder prediction 128 155 - -
Lal22g0538 647 Pfam Transcriptional repressor TCF25 242 565 IPR006994 -
Lal22g0538 647 MobiDBLite consensus disorder prediction 24 116 - -
Lal22g0538 647 MobiDBLite consensus disorder prediction 59 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0538 Lal-Chr22 3590667 3595012 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0538 K24970 - gmx:100782875 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0538 22 3590667 3595012 Lal22g0538 22 3590667 3595012 ECH
Lal6g0595 6 3821344 3826317 Lal22g0538 22 3590667 3595012 LSH