Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0532 ATGAAAGATGGAACCACCAACACACAGAAATCTTCATCATCCTCTCTCATTCTCGACGTTGATGACTTCAAGGGAGATTTCTCGTTTGATGCGTTGTTTGGGAACCTCGTAAGCGAAACCCTTCCGTCTTTCAAATTAGAAGAATTGGATTCGGAAGCGAATGATTCTATGCAGAATGCGACGAAATACTCGCAAGGGACTTCGTCACCATTGTTTCCTGATGTTGAAAAGCTCTTGTTATTGTTCAAGGATTCTTGTAAGGAGCTGGCTGAGCTCCGTAAACAGGTTGATGGAAGAGTCCATAATCTTAAGAAAGATGTTTCTGTTCAAGATAAAAAGCATAGAAAGACACTTGCTGAGCTAGAGAAAGGTGTAGATGGATTATTTGAAAGCTTTGCAAGGTTGGACTCACGTATTTCAAGTGTTGGTCAGACCGCTGCAAAGATTGGAGATCATCTCCAGAGTGCAGATGCTCAGCGAGAAACTGCCAGTCAGACAATTGAGCTGATAAAATACTTAATGGAGTTCAATAGCAGCCCAGGCGATTTGTTGGAGATTTCACCTCTTTTTTCTGATGATAGCCGTGTTGCTGAGGCTGCTTCAATTGCTCAAAAATTACGGTCATTTGCTGAAGAAGATATTGGAAGACAAGGCATATCAGCTGTAGGAAATGCAACTGCTAGCAAAGGATTGGAAGTTGCAGTTGCTAATTTACAGGACTACTGCAATGAATTAGAGAATAGGTTGCTTTCTCGGTTTGATGCAGCATCACAGAAAAGAGAATTGACTGGTATGGCAGAATGTGCCAAAATTTTGTCTCAGTTCAACAGGGGTACAAGTGCCATGCAACATTATGTGGCAACACGCCCAATGTTTATTGATGTTGAAGTAATGAATGCTGACACTAGGCTGGTTCTCGGCGACCAGGCTGCAGAAGCTAGTCATAGTAATGTTGCTGGTGGACTTTCGTCCTTGTACAAAGAAATCACAGATACTGTTCGTAAAGAGGCAGCAACGATCACGGCTGTATTCCCTTCTCCCAGTGAAGTCATGTCGATTTTAGTTCAGCGAGTTTTAGAACAGCGAATCACTTCCCTTCTGGACAAATTATTAGTGAAACCCTCTCTCATGAACTTACCTTCCATGGAGGAAGGTGGACTCTTATCATATCTTCGAATACTGGCTGTGGCGTATGAAAAGACTCAAGAACTTGCTTCAGATCTACGAGCTGTGGGATGCGGTGATTTGGATGTTGAGGGTCTGACAGAGTCCTTGTTTTCAAGTCACAAGGATGAATACCCCGAGTATGAACAGGCATCGCTTAGACAATTATATAAGGCGAAGATGGAGGAGTTGCAAGCTGAAGGCCATCGAATTTCTGATTCATCTGGGTCAATTGGACGGTCAAAAGGATCTTCAATAGCTTCTTCTCAGCATCAATTATCTGTTACTGTTGTGACAGAGTTTGTTCGTTGGAATGAAGAAGCAATCTCAAGATGCAATATCTTTTCTTCCCAGCCAGCCACACTTGCAACCTATGTAAAAGCAGTGTTTACTTGCCTGCTTGACCAAATCAGTCAATATATAGCAAATGGGCTCGAACGGGCAAGAGAGAGCCTGACTGAAGCAGCTAATTTGAGGGAGAAATTTGTGCTGGGTACAAGTGTTGGCCGTAGAGCCACATCTGCTGCAGAGACTGCTGCTGCTGCTGGTGAAAATGGCTTCAGATCTTTCATGGTTGCTGTACAACGTTCAGGAAGCAGTGTTGCTGTTATTCAACAATATTTTGCAAATTCTATATCTCGGCTTTTGCTCCCTGTGGATGGTGCACATGCTGCTTCTTGTGAAGAAATGGCTACAGCAATGTCCAGAGGAGAGGCTGCTGCATATAAAGGATTACAACAGTGCATTGAAACTGTCATGGCTGAGGTGGAGCGATTGCTATCATCTGAGCAGAAGGCTACAGATTACCGATTACCTGACGATGAAATGCTTCCTGACCACCGGGCAACCAATGCCTGTTCAAGGGTTGTGAATTATCTTTCTCGTGTGCTGGAATCTGCATTCACTGCTCTAGAAGGTCTTAACAAACAAGCATTCCTGACTGAGTTGGGGAACCGCTTACACAAGGTGCTGCTAAACCATTGGCATAAGTTTACTTTTAATCCAAGTTCATGTGCTAATCACAAATTGATCTTCCTCTATCATAGAGAGTATTTCTTCTACCCGTTGCATGCTTATGAGTTACTTTACAGTGGGGGATTGCGACTGAAGCGTGATATTACTGAATATGGAGAATTTGTGCGTACTTTCAACACTCCTGCTGTTGATGAAAAATTTGAGTTGCTGGGCATAACGGCCAACGTCTTTATTGTTGCTCCTGAGAGCCTTTCAACTTTGTTTGAGGGTACACCTAGCATTCGGAAAGATGCACAGAGGTTTATTCAACTCAGGGACGACTACAAGAGTGCCAAGCTTGCATCAAAGCTGAGTTCCTTGTGGGCTTAA 2508 0.4338 MKDGTTNTQKSSSSSLILDVDDFKGDFSFDALFGNLVSETLPSFKLEELDSEANDSMQNATKYSQGTSSPLFPDVEKLLLLFKDSCKELAELRKQVDGRVHNLKKDVSVQDKKHRKTLAELEKGVDGLFESFARLDSRISSVGQTAAKIGDHLQSADAQRETASQTIELIKYLMEFNSSPGDLLEISPLFSDDSRVAEAASIAQKLRSFAEEDIGRQGISAVGNATASKGLEVAVANLQDYCNELENRLLSRFDAASQKRELTGMAECAKILSQFNRGTSAMQHYVATRPMFIDVEVMNADTRLVLGDQAAEASHSNVAGGLSSLYKEITDTVRKEAATITAVFPSPSEVMSILVQRVLEQRITSLLDKLLVKPSLMNLPSMEEGGLLSYLRILAVAYEKTQELASDLRAVGCGDLDVEGLTESLFSSHKDEYPEYEQASLRQLYKAKMEELQAEGHRISDSSGSIGRSKGSSIASSQHQLSVTVVTEFVRWNEEAISRCNIFSSQPATLATYVKAVFTCLLDQISQYIANGLERARESLTEAANLREKFVLGTSVGRRATSAAETAAAAGENGFRSFMVAVQRSGSSVAVIQQYFANSISRLLLPVDGAHAASCEEMATAMSRGEAAAYKGLQQCIETVMAEVERLLSSEQKATDYRLPDDEMLPDHRATNACSRVVNYLSRVLESAFTALEGLNKQAFLTELGNRLHKVLLNHWHKFTFNPSSCANHKLIFLYHREYFFYPLHAYELLYSGGLRLKRDITEYGEFVRTFNTPAVDEKFELLGITANVFIVAPESLSTLFEGTPSIRKDAQRFIQLRDDYKSAKLASKLSSLWA 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0532 835 PANTHER EXOCYST COMPLEX COMPONENT SEC10-LIKE PROTEIN-RELATED 751 835 - -
Lal22g0532 835 PANTHER EXOCYST COMPLEX COMPONENT SEC10-LIKE PROTEIN-RELATED 1 725 - -
Lal22g0532 835 Coils Coil 228 248 - -
Lal22g0532 835 PANTHER SEC10 1 725 IPR009976 GO:0005737|GO:0006887
Lal22g0532 835 PANTHER SEC10 751 835 IPR009976 GO:0005737|GO:0006887
Lal22g0532 835 Pfam Exocyst complex component Sec10 471 723 IPR009976 GO:0005737|GO:0006887
Lal22g0532 835 Pfam Exocyst complex component Sec10 752 829 IPR009976 GO:0005737|GO:0006887
Lal22g0532 835 Pfam Exocyst complex component Sec10 126 453 IPR009976 GO:0005737|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0532 Lal-Chr22 3546198 3557460 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0532 K19984 - gmx:100820430 1295.8