Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0483 ATGCAAAGTTCAGGAGGAGGGTCATTGGTAAAACAGTTAAGCATGAAGGAAGCTTGGAAATCAACATCAAATAGGTGGAGTGGGAAAGACAACTATAACCCTGTTGGTGAGGCAAGTCTGAATCAAATGGAAGGATTTACTATGTATGGGAATGAGGACAATGGAATTATGCTTAGGAAGAGAGTCATGGTGCTCATTGATAACACTTCATATTCCAAGCATGCAATGTTGTGGGCACTCACACATGTAGCAAATAAGGCTGATTTTCTCACTCTTCTTCATGTTGTCCCTCCACATAAGACTTCTGAGTCTTCTTCTTCTTCTACCAATATTCTCAACTATCTTGGCTCCCTTTGCAAAGATTGCAAGCCAGAGGTGAAAGTGGAAGCACTTGTAATCCAAGGACCAAAACTGGCCACAGTGATGAGCCAAGTGAAGAAGCTGGAGGTATCTGTCTTGGTCTTAGGCCAAAAGAAGCCTTCTACTCTCCTCAGCTGCCTGTGTGGAAGCAGCAGTAGCAGCACAGAGGAGTTAACTGAGCATTTCATCAACAATGCAGAATGCTTAACAATTGGAGTGAGGAAGAGAAGTCAAGGCATGAATGGTTACCTTATCAGCACAAGGTGGCAGAAGAACTTCTGGCTGCTAGCTTAA 654 0.4343 MQSSGGGSLVKQLSMKEAWKSTSNRWSGKDNYNPVGEASLNQMEGFTMYGNEDNGIMLRKRVMVLIDNTSYSKHAMLWALTHVANKADFLTLLHVVPPHKTSESSSSSTNILNYLGSLCKDCKPEVKVEALVIQGPKLATVMSQVKKLEVSVLVLGQKKPSTLLSCLCGSSSSSTEELTEHFINNAECLTIGVRKRSQGMNGYLISTRWQKNFWLLA 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0483 217 Gene3D HUPs 58 200 IPR014729 -
Lal22g0483 217 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 217 - -
Lal22g0483 217 CDD USP_Like 61 161 - -
Lal22g0483 217 Pfam Universal stress protein family 60 173 IPR006016 -
Lal22g0483 217 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 217 - -
Lal22g0483 217 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 60 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0483 Lal-Chr22 3198133 3200709 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0483 - - lang:109357322 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1126 18 14220355 14222049 Lal22g0483 22 3198133 3200709 LSH
Lal22g0483 22 3198133 3200709 Lal6g0528 6 3364149 3366298 LSH