Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0477 ATGGGCTTTTCAAAGGAACAGCTTCTTGCGCGCTTAAGGGAGCTTCAAATTGAATTTTCCCAGTATGAACATCCAGTTATTTTGACAGTTGAAGCTGGGGAAAAATATGTTGGACATTTAAAGGGTGGGAAATGTAAAAATTTATTTTTGAAGGACAAGAAACAAAGGTTTTATATTTTTTCTGCTTTAACTGAGACCAAAGTAGATCTAAAGGTGTTATCTCAGCGACTCGGTTTAGGAAAGGGAGGTTTGAGAATGGCACCTGAAGAGGCTTTAGGTGAAATACTTCAGGTGCCCTTGGGTTGTGTCACTCCATTTGCAGTAGTAAATGAATCAGCAGGAGATGTTTTGCTGTTATTGGACCAAGGGTTGAAGACTCAGGAGGTGTGCTTATTCCATCCACTGTCAAATGACATGACAATATCTCTAAATGCTCGTGAACTTGAAAAGTTTCTGAAGTCAATAGGAAGGGATCCCGTATATGTTGATTTCGAGGCCAATCCTACAGTGGGGAAAGATCAACCCCCTGATCTAGCTGCACTAGTTCCATCCAGCTCAATTGTTTTGTCCGATCGACCAGAAAAACAGCCTTCACCACAATTACTGACAAATGTAAACCATGCTCCTGTGGATAATAAGCCCAAGACGATTTCGGGTAAAAGTTCTATCAACTGTGAAAAAGTTTCCAAGCCATCCATTAATGAAAAAAATACAAAAGGGAAACATGTCAACAATGGTCAATCATCAAGCCACTCTGTAGATATTGGGCTATCAGTGGATGAAATATTGCACAAAGCATCAGAATTATTGCTTTCAGAGGTTAAAAAAACCTATGATTTCATTCAAATTCGATTATTCGCTATGCTTTCTGCATCTTACCCACCAATTATGATCATGCAGATCAATGAAGAAGCTATAAAGCAACATGGAGAGCATCTGGGTACTGTGGTATCCGACAATCTACGGAAAAGTCTCAGCTCAGATTTGAAAGACCTTGCTATGATAATTAAAAATACAGCATACACAGAAGGGTTCCATGCTGGTATTCATCATTGGCCTAGACGCTTGTGA 1071 0.3959 MGFSKEQLLARLRELQIEFSQYEHPVILTVEAGEKYVGHLKGGKCKNLFLKDKKQRFYIFSALTETKVDLKVLSQRLGLGKGGLRMAPEEALGEILQVPLGCVTPFAVVNESAGDVLLLLDQGLKTQEVCLFHPLSNDMTISLNARELEKFLKSIGRDPVYVDFEANPTVGKDQPPDLAALVPSSSIVLSDRPEKQPSPQLLTNVNHAPVDNKPKTISGKSSINCEKVSKPSINEKNTKGKHVNNGQSSSHSVDIGLSVDEILHKASELLLSEVKKTYDFIQIRLFAMLSASYPPIMIMQINEEAIKQHGEHLGTVVSDNLRKSLSSDLKDLAMIIKNTAYTEGFHAGIHHWPRRL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0477 356 CDD PrdX_deacylase 5 162 - -
Lal22g0477 356 Gene3D - 2 171 IPR036754 GO:0002161
Lal22g0477 356 MobiDBLite consensus disorder prediction 190 231 - -
Lal22g0477 356 Pfam Aminoacyl-tRNA editing domain 24 151 IPR007214 GO:0002161
Lal22g0477 356 PANTHER PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED 1 277 - -
Lal22g0477 356 PANTHER PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED 296 352 - -
Lal22g0477 356 SUPERFAMILY YbaK/ProRS associated domain 3 164 IPR036754 GO:0002161
Lal22g0477 356 PANTHER YBAK DOMAIN-CONTAINING PROTEIN 296 352 IPR040285 -
Lal22g0477 356 PANTHER YBAK DOMAIN-CONTAINING PROTEIN 1 277 IPR040285 -
Lal22g0477 356 MobiDBLite consensus disorder prediction 190 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0477 Lal-Chr22 3160011 3164549 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0477 - - gmx:100812776 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0477 22 3160011 3164549 Lal22g0477 22 3160011 3164549 ECH