Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0471 ATGGGACGGTGCCATTGCCACCTATGGGTAAGGGTTTTCCTACAAATACAACAGTCGAAGAAATCAAAATTTCATAACAAGAGAAAAAGTCTAAAAAAAATGGAGTTCCTAAGGGTGCAAACCGTAGCTTCAAATTCAAAAGATGTTGCTATTCCTGACATGTTTGTTAGGCCAGAGACTGAGCAACCAGGCATCACAACAGTTCATGGGGTGAAACTAGAGGTACCCATAATTGATTTCAACAACCCTGATGAAGGGAAAGTCCTAAATGAAATTATGGAAGCAAGTAAAAAATGGGGTATGTTCCAAATTGTGAACCATGAGATACCTAGCCATGTTATAAAAAAATTGCAAAGTGTGGGAAAAGAGTTCTTTGAGTTACCACAAGAAGAAAAAGAACTATATGCTAAGGATCCTGAGTCAAAATCTATAGAAGGTTATGGCACAAAGCTTCAGAAAGAGTTGAATGGAAAGAAAGGTTGGGTGGACCATTTGTTTCACATTATTTGGCCACTTTCCTCCATTAATTATCGTTTCTGGCCTAAGAACCCTCCTTCTTACAGGGAGGCCAATGAGGAATACCTGAAGTACTTGCATGGGGTGGTAGACAAACTTTTCAAGAGCATGTCAATTGGGCTAGGGTTTGAAGAAAATGAGCTAAAAGAAGCTGCAGGTGGAGATAGCATGATTCACCTTTTGAAGATTAATTACTACCCACCTTGTCCATTCCCTGATCTTGTTGTAGGTGTTCCACCACATACAGACATGTCTTACATCACCATTCTTGTCCCCAATGACGTGCAAGGCCTTCAAGCCTTCAGGGATGGTCATTGGTACGATGTTAAGTATGTTCCCAATGCCCTTGTCATTCACATTGGCGACCAAATGGAGATAATGAGCAATGGGAAATATAAGGCAGTGTTCCACAGAACAACAGTGAGCAAAGAAGAGACAAGAATTTCATGGCCAGTATTCATAGAGCCTCAACCTGAATACGAAGTTGGTCCTCACCCAAAATTGGTTAATGAAGAAAATCCTCCAAAATACAAGACCAAGAAATACAAGGATTATGCTTACTGTAAGCTCAACAAAATCCCTCAATAA 1104 0.4022 MGRCHCHLWVRVFLQIQQSKKSKFHNKRKSLKKMEFLRVQTVASNSKDVAIPDMFVRPETEQPGITTVHGVKLEVPIIDFNNPDEGKVLNEIMEASKKWGMFQIVNHEIPSHVIKKLQSVGKEFFELPQEEKELYAKDPESKSIEGYGTKLQKELNGKKGWVDHLFHIIWPLSSINYRFWPKNPPSYREANEEYLKYLHGVVDKLFKSMSIGLGFEENELKEAAGGDSMIHLLKINYYPPCPFPDLVVGVPPHTDMSYITILVPNDVQGLQAFRDGHWYDVKYVPNALVIHIGDQMEIMSNGKYKAVFHRTTVSKEETRISWPVFIEPQPEYEVGPHPKLVNEENPPKYKTKKYKDYAYCKLNKIPQ 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0471 367 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 229 328 IPR005123 -
Lal22g0471 367 Pfam non-haem dioxygenase in morphine synthesis N-terminal 75 170 IPR026992 -
Lal22g0471 367 Gene3D - 35 365 IPR027443 -
Lal22g0471 367 PANTHER FLAVONOL SYNTHASE/FLAVANONE 3-HYDROXYLASE 37 364 - -
Lal22g0471 367 Pfam 2OG-Fe(II) oxygenase superfamily 230 328 IPR044861 -
Lal22g0471 367 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 37 364 - -
Lal22g0471 367 SUPERFAMILY Clavaminate synthase-like 48 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0471 Lal-Chr22 3123525 3126403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0471 45 358 Glycosyltransferase AT5G59530 30.368 3.93e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0471 K05278 - gmx:778157 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0471 22 3123525 3126403 Lal22g0471 22 3123525 3126403 ECH