Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0467 ATGCATCTTTTCTGCTGCGTCTCCGACCACTCTTCTTCACTCAAAGCTCATTTCGCCACCGACTTCTCCACGCCTCCACTATCACCAGCCGTTAGATCCGAACACAGTCACAATCACAATAATAACAATAACAGTGAAGTGAAGATTAACGACCTTGTAGGGAACGGAATCTCAGGGATACTGTACAAATGGGTTAACTATGGCAAAGGATGGAGGCCTCGTTGGTTTGTGCTACAAGATGGAGTTCTCTCTTACTATAAGATTCACGGACCTCGTAAAATCGTTGTTAATTTCGAAACCGTGAAAAGCTCTAAGGTCATTGGCGAAGAATCATTGCGTAGAATCTCTCGTAATCATGATTCTCATGATCATCACCATAATTTGCAGTTACATCAACGGAATCCCTCTGGTGAAATCCACCTCAAGGTTTCAACTATTGGTGAGAGCAAATCAGATGACAAGCGGTTTTCCATCTTCACTGGAATAAAGAGACTACACTTGAGGGCTGAGACTCGCGAAGATCGAGCGGCATGGGTGGAAGCCTTGCAAGCAGTGAAAGATATGTTCCCCCGGATGTCCAGCAGTGAACTGATGTCTCCGGTAGACCATGTTACCATTTCGACGGAGAAACTGAGGCGTCGGCTTCTGGAAGAAGGCCTGAATGAGGCTGCCATCCAGGATACTGAGCAAATTATGAGAAACGAGTTTGCAATGCTACAACACCAGCTTGTGCTGCTTAAGCAGAAGGAGTTGACCCTAGTCGACACTTTAAGACAGTTAGAGACAGAAAAGGTTGATCTAGAGAACACTGTTGTTGATGAGAGCCAAAGACACATGAATGATGAAGAGGTTTCTTCTAGATTAAGGCAGGAGAAGTCTAATGAAGCAAGTCCAAGTGAGTCTGAGTATGACAGTGAGAGAAACGATGCAGCCGAGGAAGAAACAGATGATGATGACAACCCCTTTTATGACACTCGTGATTTTCTATCATCCAGTTCGTATAAAAGTGTTGGGTCTGATTATAGAGTATCTTCGTTATCTTCGGATGACGAAGGACTCTATGCAGTTGAATGGGATGAGGATCTAGATCCTGTGATTAGATCTGTTGGGACAGGCTATCCATATGTTAAGCGGCGTAAGAAATTGCCTGACCTTGTTGAAAAGGAGAAAGGAGTCAGTCTTTGGTCAGTGATTAAGGATAATATTGGGAAGGATCTGACAAAAGTTTGCCTTCCTGTATATTTTAATGAGCCACTCTCTTCTCTGCAAAAATGCTGTGAAGAAATGGAGTATTCATATCTACTGGACCGAGCATATGAATGGGGAAGGAGGGGTAATAGCCTCATGAGGATTCTCAATGTTGCTGCTTTTGCTGTATCTGCCTATGCCTCGACTGAAGGGAGAATTTGCAAACCATTCAATCCATTACTTGGGGAAACGTATGAGGCTGACTTTCCAGATAAAGGCCTTCGTTTTATCTCAGAGAAGGTCAGTCATCACCCGATGATAGTTGCATGTCACTGTGAGGGTACAGGCTGGAAATTTTCGGGGGATAGCAACTTAAAGAGCAAGTTTTGGGGCCGATCTATTCAGCTTGATCCGGTTGGTATTTTGACATTGGAGTTTGTTGATGGGGAAGTATTTCAGTGGAGCAAGGTTACTACATCAATATACAATCTCATATTGGGAAAGCTGTACTGTGATCACTATGGTACTATGTTTATACAGGGAAATCGAGACCACTCATGTAAACTAAAATTCAAGGAACAGTCAATAATTGATCGAAATCCTCACCAGGTTCAAGGTATTGTTCAGGATAAAAATGGGGAAACAGTCTCTACTATATTTGGGAAATGGGATGAAAGCATGCATTATGTTAATGGAGACCACAGTGGGAAGGGTAGAGGTTATGACTCTGTGTCAGAAACCCATTGTCTCTGGAAGCGGAGCAAGCCCCCGAAGTTTCCCACTAGATATAACTTCACTCGCTTTGCCATCACATTAAATGAACTTACCCCAGGGTTGAAGGAAAAGCTGCCACCTACAGATTCCAGGTTAAGACCAGACCAAAGGTATTTGGAAAACGGGGAGTATGACATGGCAAATTCAGAAAAGTTACGACTAGAGCAACGGCAACGACAGGCTCGGAAGATGCAAGAAAGCGGTTGGAAACCACGGTGGTTTGGTAGGGATGATGCAAGTGGTACGTACCGTTACTTAGGAGGGTATTGGGAGTCCCGAGAACAACGAAAGTGGGACTCATGTCCTGACATCTTTGGCCAACTTCCTTCTGATGAAGGTCAAATTACATTTTAG 2316 0.4383 MHLFCCVSDHSSSLKAHFATDFSTPPLSPAVRSEHSHNHNNNNNSEVKINDLVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPRKIVVNFETVKSSKVIGEESLRRISRNHDSHDHHHNLQLHQRNPSGEIHLKVSTIGESKSDDKRFSIFTGIKRLHLRAETREDRAAWVEALQAVKDMFPRMSSSELMSPVDHVTISTEKLRRRLLEEGLNEAAIQDTEQIMRNEFAMLQHQLVLLKQKELTLVDTLRQLETEKVDLENTVVDESQRHMNDEEVSSRLRQEKSNEASPSESEYDSERNDAAEEETDDDDNPFYDTRDFLSSSSYKSVGSDYRVSSLSSDDEGLYAVEWDEDLDPVIRSVGTGYPYVKRRKKLPDLVEKEKGVSLWSVIKDNIGKDLTKVCLPVYFNEPLSSLQKCCEEMEYSYLLDRAYEWGRRGNSLMRILNVAAFAVSAYASTEGRICKPFNPLLGETYEADFPDKGLRFISEKVSHHPMIVACHCEGTGWKFSGDSNLKSKFWGRSIQLDPVGILTLEFVDGEVFQWSKVTTSIYNLILGKLYCDHYGTMFIQGNRDHSCKLKFKEQSIIDRNPHQVQGIVQDKNGETVSTIFGKWDESMHYVNGDHSGKGRGYDSVSETHCLWKRSKPPKFPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEYDMANSEKLRLEQRQRQARKMQESGWKPRWFGRDDASGTYRYLGGYWESREQRKWDSCPDIFGQLPSDEGQITF 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0467 771 Gene3D - 690 755 - -
Lal22g0467 771 Pfam Oxysterol-binding protein 393 748 IPR000648 GO:0008289
Lal22g0467 771 MobiDBLite consensus disorder prediction 271 327 - -
Lal22g0467 771 SUPERFAMILY PH domain-like 57 199 - -
Lal22g0467 771 MobiDBLite consensus disorder prediction 271 305 - -
Lal22g0467 771 Pfam Pleckstrin homology domain 62 183 - -
Lal22g0467 771 SUPERFAMILY Oxysterol-binding protein-like 388 764 IPR037239 -
Lal22g0467 771 Gene3D - 55 189 IPR011993 -
Lal22g0467 771 CDD PH_ORP_plant 57 193 - -
Lal22g0467 771 Gene3D - 479 653 - -
Lal22g0467 771 ProSiteProfiles PH domain profile. 54 187 IPR001849 -
Lal22g0467 771 Coils Coil 257 277 - -
Lal22g0467 771 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 41 764 IPR000648 GO:0008289
Lal22g0467 771 MobiDBLite consensus disorder prediction 306 321 - -
Lal22g0467 771 SMART PH_update 55 189 IPR001849 -
Lal22g0467 771 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 41 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0467 Lal-Chr22 3092671 3098859 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0467 K20456 - gmx:100137077 1228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0467 22 3092671 3098859 Lal22g0467 22 3092671 3098859 ECH