Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0454 ATGGCTATTAAGCTTCTTATTTTTTTGTTAGTAGCAAAAGGTCTTACCTTTGAAGGTATAGGTGCACTAACATTCTCTTCCAAGCTCATACATAGGTTCTCTGAAGAGGCCAAGGTTCATTTGGCCTCAAAGGGTAACAGTGTTTGGGTTCAATCATGGCCCAAAAGGAACAGTTCTGAGTATTCGAGGTTGCTTCTGAGCAGGGACATGACAAGGCAGAAGGTGAGGCTTGGTTCTCAGTATGAATCTCTGTATCCTTCAGAAGGAAGCAATACCTTCTCTTTTGGCAATGTCCTTGATTGGTTACATTACACATGGATTGATATAGGGACTCCAAATATTTCATTTCTTGTTGCATTGGATACTGGAAGTGATATGCTTTGGGTTCCTTGTGATTGTATAGAATGTGCTTCCTTGTCAGCTGATCATTACAATGTATTGGATCGGGATCTGAATGAGTATAGCCCATCATTGTCCAGCACCAGCAGACATCTACCCTGCAGTCATCAGTTATGTGACCTAAGTTCCGAATGCAAAGGTCCTAAAGATCCATGCCCTTATAAAGATCAATACGCCTCGGATAATACCTCAAGCTCTGGATTTCTTATTGAAGACAAACTACATTTGGCATCCGATGGCAGAAATGCAGCACAAAGTTCTGTGCAAGCCTCTATTATTTTAGGTTGTGGAAGGAAACAAAGTGGTGGCTATTTAGATGGAGCTGCTCCCGATGGCCTGTTGGGGCTTGGACCTGGGAGTATTTCTGTTCCAAGTTTGCTGGCAAAGGCAGGACTTATTCGAAATTCATTTTCAATCTGTTTAAATGAGAATGATTCCGGGAGAATTCTCTTTGGTGACCAAGGGCATATCAACCAACGATCTACACCGTTCTTGCCTGTAGAAGGGAGATTATCTAGTTATTTTGTTGGAGTGGAAAGCATCTGTGTTAGGAGTTTTTGTCTCAAGCAAACTGGATTTCAAACACTTATCGACAGTGGCACTTCTTTCACCTATCTTCCCAATGAAGTTTATGAGAAAGTTGTAGTGGAGTTTGACAAACACGTAAATGCAACCAGGATTACCGACCAACAAAGCCCATGGGAGTACTGCTATAATGCCAGTTCACAGGAGTTGAATAATATTCCACAGATGAAATTCACTTTCTCTAAGAATCAAACCTTTTTAATTCAAAATCCACTGTTAACTTTTCCTGTCAGTCAGGAATATACTGCATTTTGTTTGACTATGTTCAAAACCGATGAGGACTATGGTACCATTGGACAGGACTTCCTGAAGGGTTATCGCATGGTGTTTGATAGGGAGATTCTTCGGTTTGGCTGGTCTAGTCAAGATAACATGGGAGATACAGAGAATTTAACATCACCATCCCATGGTGGATCACCAAATCCTTTACCAGCTAATCAGCAGCAGACTATCCCGAATACAAGCGCCGAACCACCTGCCGATGCCGGAAAGACTTCCCTTAAACCCTCCATAGCCACCATATCCAGAGTCACCTCTTGGCATTTATTAAGTTCTTTGTCAATTATCTTTATTAATGGCTATCTGGTTAAGCTTATCTAA 1584 0.4154 MAIKLLIFLLVAKGLTFEGIGALTFSSKLIHRFSEEAKVHLASKGNSVWVQSWPKRNSSEYSRLLLSRDMTRQKVRLGSQYESLYPSEGSNTFSFGNVLDWLHYTWIDIGTPNISFLVALDTGSDMLWVPCDCIECASLSADHYNVLDRDLNEYSPSLSSTSRHLPCSHQLCDLSSECKGPKDPCPYKDQYASDNTSSSGFLIEDKLHLASDGRNAAQSSVQASIILGCGRKQSGGYLDGAAPDGLLGLGPGSISVPSLLAKAGLIRNSFSICLNENDSGRILFGDQGHINQRSTPFLPVEGRLSSYFVGVESICVRSFCLKQTGFQTLIDSGTSFTYLPNEVYEKVVVEFDKHVNATRITDQQSPWEYCYNASSQELNNIPQMKFTFSKNQTFLIQNPLLTFPVSQEYTAFCLTMFKTDEDYGTIGQDFLKGYRMVFDREILRFGWSSQDNMGDTENLTSPSHGGSPNPLPANQQQTIPNTSAEPPADAGKTSLKPSIATISRVTSWHLLSSLSIIFINGYLVKLI 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0454 527 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 6 469 - -
Lal22g0454 527 Gene3D Acid Proteases 288 459 IPR021109 -
Lal22g0454 527 Pfam Xylanase inhibitor C-terminal 321 448 IPR032799 -
Lal22g0454 527 SUPERFAMILY Acid proteases 97 451 IPR021109 -
Lal22g0454 527 PANTHER ASPARTYL PROTEASES 6 469 IPR001461 GO:0004190|GO:0006508
Lal22g0454 527 Gene3D Acid Proteases 96 286 IPR021109 -
Lal22g0454 527 MobiDBLite consensus disorder prediction 454 488 - -
Lal22g0454 527 ProSiteProfiles Peptidase family A1 domain profile. 103 448 IPR033121 -
Lal22g0454 527 MobiDBLite consensus disorder prediction 454 493 - -
Lal22g0454 527 Pfam Xylanase inhibitor N-terminal 104 286 IPR032861 -
Lal22g0454 527 PRINTS Pepsin (A1) aspartic protease family signature 109 129 IPR001461 GO:0004190|GO:0006508
Lal22g0454 527 PRINTS Pepsin (A1) aspartic protease family signature 328 339 IPR001461 GO:0004190|GO:0006508
Lal22g0454 527 PRINTS Pepsin (A1) aspartic protease family signature 424 439 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0454 Lal-Chr22 2967365 2972042 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0454 96 451 Miscellaneous Gene Families AT1G44130 27.559 5.77e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0454 - - lang:109359439 853.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0454 22 2967365 2972042 Lal22g0454 22 2967365 2972042 ECH