Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0450 ATGTATAGCATAATGAGCAAGCTTCGCAATTTAGACGCGTATCCTAAAATCAACGAAGATTTCTATAGCCGCACGCTCTCTGGTGGCGTCATAACTCTCGCTTCTTCAATTCTCATGTTATTGCTCTTCTTCTCCGAGCTTCAATTGTATCTCCATGCTGCAATTGAGACCAAACTTATTGTAGATACTTCTAGAGGTGAAACGCTGCGTATCAATTTTGATGTTACATTTCCTGCCCTATCATGTTCGGTTCTCAGTATTGATGCCATGGATATCAGTGGAGATCAGCATCTAGATGTAAAACATGATATAATTAAGAAAAGATTAGACTCTCTTGGCAATGTGATAGAAACGAGACAGGACGGAATTGGTGCTCCCAAGGTTGAAAAGCCCTTGCAACGACATGGAGGCAGGCTTGAGCACAATGAGACGTATTGTGGATCTTGTTATGGTGCAGAAGCGACAGATGAGGACTGTTGTAATTCTTGTGAGGAAGTTCGCGAAGCATATCTAAAAAAAGGTTGGGCACTTTCAAATCCAGATATAATCGACCAGTGCAAAAGAGAAGGATTCTTACAAAGAATCAAGAATGAAGATGGTGAAGGATGCAATGTATATGGTTTTTTGGAAGTAAATAAGGTGGCAGGGAATTTCCATTTTGCTCCTGGGAAAAGCTTTCAGCAATCTGGTGTACTTGTACATGAACTGCTGGCCTTTCAAAAGGACTCTTTTAATTTAAGTCACCACATCAACAGATTGGCTTTTGGAGAGTATTTCCCTGGTGTGATAAATCCACTAGATAGCGTGCAGTGGACACAAGATACACCAAGTGGGATGTATGAGTATTTTATTAAGGTTGTGCCTACTGTGTACACTGACGTGAGCGGGCATACTATCCAGTCAAACCAGTTTTCTGTGACAGAGCACACCGTGACTGGAGACCGTCTTCGGTCCCTACCCGGAGTTTTCTTTTTCTATGACCTTTCTCCAATTAAGGTTACTTTTACAGAAGAGCATATCTCATTCTTACACTTCCTTACTAATGTGTGTGCCATAGTTGGAGGTGTTTTTACCGTTTCTGGAATACTAGATTCATTTATCTATCACGGTCAAAAGGCTATCAAGAAGAAGATGGAAATTGGTAAATTTAACTGA 1155 0.4078 MYSIMSKLRNLDAYPKINEDFYSRTLSGGVITLASSILMLLLFFSELQLYLHAAIETKLIVDTSRGETLRINFDVTFPALSCSVLSIDAMDISGDQHLDVKHDIIKKRLDSLGNVIETRQDGIGAPKVEKPLQRHGGRLEHNETYCGSCYGAEATDEDCCNSCEEVREAYLKKGWALSNPDIIDQCKREGFLQRIKNEDGEGCNVYGFLEVNKVAGNFHFAPGKSFQQSGVLVHELLAFQKDSFNLSHHINRLAFGEYFPGVINPLDSVQWTQDTPSGMYEYFIKVVPTVYTDVSGHTIQSNQFSVTEHTVTGDRLRSLPGVFFFYDLSPIKVTFTEEHISFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKAIKKKMEIGKFN 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0450 384 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 8 97 IPR039542 -
Lal22g0450 384 Pfam Endoplasmic reticulum vesicle transporter 149 364 IPR012936 -
Lal22g0450 384 PANTHER ENDOPLASMIC RETICULUM VESICLE TRANSPORTER PROTEIN 2 384 - -
Lal22g0450 384 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 2 384 IPR045888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0450 Lal-Chr22 2940524 2946861 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0450 K20367 - gmx:100782309 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0450 22 2940524 2946861 Lal22g0450 22 2940524 2946861 ECH
Lal22g0450 22 2940524 2946861 Lal6g0484 6 3091377 3096833 LSH