Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0439 ATGAGTGCAATAGAAAAACCTCATGCTGTTTGTATCCCATACCCAGCACAGGGTCACATAAACCCAATGCTCAAATTAGCAAAGCTCCTTCATTTCAAAGGTTTTCATATAACTTTTGTTAACACAGAGTATAACCATAGACGCATTCTCAAATCAAGAGGTCCTGATTCTCTGAATGGTCTCTCATCATTTCGTTTTGAAACCATTCCTGATGGTCTTCCTGACTCAGATGGAGATGCCACACAGGATATACCTTCTCTATGTGAGTCTACCAGAAAAACTTGCTTACCTCACTTTAAGAACCTCATTTCCAAACTTAATAATGCCTCAGATGATGTTCCTCCTGTTAGTTGTATAGTTTCTGATGGTGTCATGAGTTTTACCGTTGAGGCTGCTGAAGAATTTGGCATCCCAGATGTTCTGTTCTGGACAACTAGTGCATGTGGGTTCATGTGTTACACTCAGTATCATCAACTCATTCAAAAAGGCTTAGCACCCCTCAAAGACATAAGTTATATCACAAATGGATATTTGGAGACTACCATTGATTGGGTGCCAGGAATCAAGGAAATCAAACTGAAAGATATCCCTACCTTCTTCAGAACCACAAACCCAGATGATCTTATGCTTGATTTCGTACTCGGGGAGTGTAAGAGATCTGAAAGAGCTTCTGCGATCATATTGAACACGTTTGATGCATTAGAGCATAACATTTTGGACGCATTCAACTCCTCCAATTTGCCTCCTGTATATTCCATTGGTCCATTGCATTTACTCTTAAATAATGTAACTGATAAGAATTTGGAAGCAATAGGGTCCAACCTTTGGAAGGAAGACCCTGAGTGTCTAGAATGGCTCAACACAAAAGAACCCAATAGTGTTGTTTATGTGAACTTTGGGAGTATTACAGTAATGACAAGTGACCAATTGATTGAGTTTGCATGGGGGCTAGCTAATAGCAACAAAACCTTCGTATGGGTTATAAGACCAGATCTTGTGGCAGGTGAAAACGCTGTTCTACCTCCAGAATTTGTGACACAGACCAAAAATAGAGGTTTAATGTTAAGTTGGTGCCCGCAAGAGGAAGTACTGGCCCACCCAGCAATCGGTGGATTCTTGACTCATAGTGGTTGGAATTCAACGTTGGAAAGTGTATGTGTGGGTGTTCCAATGATATGTTGGCCTTTCTTTGCGGAGCAACAAACCAATTGTTTTTTCACCTGCAAGGAATGGGAAATAGGGTTGGAGATAGAAGATGCTAAAAGAGATAAAGTTGAAAGTCTTGTTAAGGTGTTGATGGATGAGAAAAAGGGTAAAGAAATGAAGGAAAAAGCTTTGGAATGGATGAGATTAGCAAAACATGCTGCTTCTGGCCTAGATGGACCTTCCTTTCTTAATCTAGACAAAATGGTTCATCAAATTCTTCTGGGTCAAACTGATAAAAATTAG 1449 0.4003 MSAIEKPHAVCIPYPAQGHINPMLKLAKLLHFKGFHITFVNTEYNHRRILKSRGPDSLNGLSSFRFETIPDGLPDSDGDATQDIPSLCESTRKTCLPHFKNLISKLNNASDDVPPVSCIVSDGVMSFTVEAAEEFGIPDVLFWTTSACGFMCYTQYHQLIQKGLAPLKDISYITNGYLETTIDWVPGIKEIKLKDIPTFFRTTNPDDLMLDFVLGECKRSERASAIILNTFDALEHNILDAFNSSNLPPVYSIGPLHLLLNNVTDKNLEAIGSNLWKEDPECLEWLNTKEPNSVVYVNFGSITVMTSDQLIEFAWGLANSNKTFVWVIRPDLVAGENAVLPPEFVTQTKNRGLMLSWCPQEEVLAHPAIGGFLTHSGWNSTLESVCVGVPMICWPFFAEQQTNCFFTCKEWEIGLEIEDAKRDKVESLVKVLMDEKKGKEMKEKALEWMRLAKHAASGLDGPSFLNLDKMVHQILLGQTDKN 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0439 482 PANTHER GLYCOSYLTRANSFERASE 4 52 - -
Lal22g0439 482 PANTHER GLYCOSYLTRANSFERASE 52 475 - -
Lal22g0439 482 ProSitePatterns UDP-glycosyltransferases signature. 357 400 IPR035595 -
Lal22g0439 482 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 456 - -
Lal22g0439 482 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 52 475 - -
Lal22g0439 482 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 4 52 - -
Lal22g0439 482 Gene3D Glycogen Phosphorylase B; 8 457 - -
Lal22g0439 482 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 176 440 IPR002213 GO:0008194
Lal22g0439 482 CDD GT1_Gtf-like 7 434 IPR002213 GO:0008194
Lal22g0439 482 Gene3D Glycogen Phosphorylase B; 277 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0439 Lal-Chr22 2861016 2863084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0439 5 478 Glycosyltransferase AT1G22360 63.445 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0439 - - gmx:100784251 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0439 22 2861016 2863084 Lal22g0439 22 2861016 2863084 ECH