Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0426 ATGGAATTCCATCAATCATTCCCGGACCAAGTTTTGGAGAACGTTCTAGAAAACGTGCTCCACTTCCTCTCCACGCGCCGAGACCGCAACGCCGCCTCATTGGTATGCCGCTCCTGGTACCGTGCGGAGGCACTCACCCGATCCGATCTCTTCATAGGAAACTGCTACGCTGTTTCGCCGAACCGAGCAACCTCACGGTTCAACCGGGTCCGGTCCATAACAGTCAAGGGAAAACCGCGGTTCGCGGACTTCGATCTGATGCCGCTTAACTGGGGGGCCCACTTCACTCCATGGGTTTTTGCCTTGTCAAAGGCCTATCCCTGGTTGGAGAAGATTCACCTGAAACGCATGTCTGTCACCGATGATGACCTTGCCCTTGTTGCCGAATCCTTCGCCGGGTTTCGAGAACTTGTCCTCGTTTGCTGCGAAGGGTTCGGCACTCGTGGACTCGCCGTAGTTGCTGCCAAGTGCAGAGTGCTGAGAGTGCTTGAACTTGTGGATTCTGTTGTTGAGGTGGGTGATGATGAAGAAGTGGATTGGATATCATGTTTTCAGGAGAGTCAAATCCATATGGAGTCTCTTGTGTTTGATTGTGTTGAGTGTCCGGTTAATTTCGGGGCTTTGGAGAGGCTAGTGGCTAGGTCACCTTGTTTGAAGAAACTTAGACTGAATTGTTATGTCTCCATTTTCCAGCTGCACCGCTTAATGCTGTGTGCTCCACAGCTTACTCATCTTGGAACAGGTTCCTTTAGTGCATCAGAGGCTGTGATGATTGGCAATCAGGAGCCAGATTATGCCTCTGCATTTGCGGCTTGCAGATCATTAGTTTGTTTATCTGGATTCAGGGAGATTCTGGCGGATTACCTTCCTGCAATATATCCGGTTTGCGCTAATCTCACTTCGTTGAATTTAAGTTACGCTGATATCAATGCAGAACAGCTCAAATCAGTCATATTCTACTGTCACAAGTTACGGACACTCTGGATGCTTGATTCCATATGTGATGAAGGCCTTCAAGCTGTTGCTGCAACTTGCAAAGATTTACGTGAGCTTCGGGTTTTCCCTGTGAACACCAGGGAGGAATCTGAAGGTCCAGTTTCTGGGGTTGGTTTGGAAGCAATTTCTCAGGGTTGTAGGAAATTGGAATCCATTTTGTTTTTCTGCCAAGGAATGACAAATGCTGCTGTAGTGGCTATGTCAAAGAATTGCCCGGATCTTGTTGTGTTTCGTCTCTGTATAATTGGGCGATATAGGACAGATCCGGTGACTCATCAACCCATGGACGAGGGTTTTGGTGCTATTGTTATGAACTGCAAGAAGCTCACCCGTCTTGCTGTGTCTGGTTTGCTGACGGATCGAGCTTTTGAATACATCGGAAGGTATGGGAAATTGGTTAGGACATTGTCCGTTGCTTTTGCTGGAGACTCTGACAGGGCCCTTAAATATGTGCTAGAAGGATGCCCTAATCTGCAAAAGCTTGAAATCAGGGATACTCCATTTGGGGATGAAGCTTTGCATTCTGGTTTGCACCATTACTATAACTTGAGATTTCTCTGGATGTCGTCCTGTAAATTGACACGCCAAGGTTGCCAAGAAGTTGCACGTGCATTGCCACGCCTGGTCTTGGAAGTGATCAACAGTGAAGAGAATGAAGCTGATGATATTGAGATTTTGTACATGTATCGGTCTCTTGTTGGACCACGGGATGATACTCCAAAAGTTGTTACCATCCTGCACTAG 1740 0.4759 MEFHQSFPDQVLENVLENVLHFLSTRRDRNAASLVCRSWYRAEALTRSDLFIGNCYAVSPNRATSRFNRVRSITVKGKPRFADFDLMPLNWGAHFTPWVFALSKAYPWLEKIHLKRMSVTDDDLALVAESFAGFRELVLVCCEGFGTRGLAVVAAKCRVLRVLELVDSVVEVGDDEEVDWISCFQESQIHMESLVFDCVECPVNFGALERLVARSPCLKKLRLNCYVSIFQLHRLMLCAPQLTHLGTGSFSASEAVMIGNQEPDYASAFAACRSLVCLSGFREILADYLPAIYPVCANLTSLNLSYADINAEQLKSVIFYCHKLRTLWMLDSICDEGLQAVAATCKDLRELRVFPVNTREESEGPVSGVGLEAISQGCRKLESILFFCQGMTNAAVVAMSKNCPDLVVFRLCIIGRYRTDPVTHQPMDEGFGAIVMNCKKLTRLAVSGLLTDRAFEYIGRYGKLVRTLSVAFAGDSDRALKYVLEGCPNLQKLEIRDTPFGDEALHSGLHHYYNLRFLWMSSCKLTRQGCQEVARALPRLVLEVINSEENEADDIEILYMYRSLVGPRDDTPKVVTILH 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0426 579 SUPERFAMILY RNI-like 34 556 - -
Lal22g0426 579 Pfam Transport inhibitor response 1 protein domain 69 114 IPR041101 -
Lal22g0426 579 SUPERFAMILY F-box domain 4 42 IPR036047 GO:0005515
Lal22g0426 579 Gene3D - 2 47 - -
Lal22g0426 579 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 5 577 - -
Lal22g0426 579 Pfam F-box 9 48 IPR041567 -
Lal22g0426 579 Gene3D Ribonuclease Inhibitor 49 578 IPR032675 -
Lal22g0426 579 PANTHER F-BOX PROTEIN FBX14 5 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0426 Lal-Chr22 2772226 2775472 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0426 - - gmx:100807836 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0426 22 2772226 2775472 Lal22g0426 22 2772226 2775472 ECH
Lal22g0426 22 2772226 2775472 Lal6g0450 6 2850121 2853692 LSH